| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0054 |
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| Symbol | |
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| ID | 4078717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 57235 |
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| End bp | 58170 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005341 |
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| Product | thioredoxin domain-containing protein |
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| Protein accession | YP_612049 |
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| Protein GI | 99079895 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.621806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA TTCTGGGCGG CGGCGCAAGC GCGGCACCTG CAGGCGATCT CATCAAGGAT
GTGACCGAAG AGACTTTTAT GGCCGATGTG GTCGAGGCCT CGATGGATGT GCCAGTTGTC
GTGGATTTCT GGGCGCCTTG GTGTGGCCCG TGCAAGACGC TTGGTCCGAT GCTGGAAGCC
GCAGTGACCA AGGCCAAAGG CGCGGTCAAG ATGGCCAAGA TCAACGTCGA TGAAAACCAG
CGCCTCGCGG CAGCACTGGC CCAGCAGGGC CTGCCGTTGC AGTCGATCCC AACGGTTGTC
GGCTTCTATC AGGGCCGCCC GGTAGATATG TTCCAGGGCG CTCTGCCGCA GTCGGAGATC
GAAGCCTTCC TGCAAAAGAT GGCCGAAGCC GCTGGCAGCA CCGCAGATGG CGGGCTGGGC
GAAGCATTGG AAACCGCAGA GCAGATGCTC GAGGAAGGCG CGGCCGCCGA TGCTGCACAG
GTCTTTGCCG CAATCCTTGG CGAAGACGAC AAGAACGCTG CGGCCTATAG CGGACTAGCG
CGGTGCCACG TGGCCATGGG CGAGCTCGAC CAGGCCGAGG CAGTGCTGAA TGGCGCTCCG
GCGGAAATCT CCACCGCAGC CGAAATCGAG GCAGCACACG CACAGATCGA ACTGGCGCGG
CAGGCTGAAA ACGCAGGGCC GGTGGCAGAG CTGCGTGCGG CGGTCGACGC CAACCCGGAC
GATCACCAGG CACGTTTTGA CCTGGCGCAG GCGCTGCACG CGGCGGGGGA CGCCGAGGCG
GCCGTGACCG AATTGCTGGA GCTGTTCCGC CGCGACCGTG AGTGGAATGA AGGGGCTGCA
AAAGCGCAGC TGTTCACCAT TTTCGAGGCG CTCAAACCCA ACGATCCGGT TGTGCTCAAT
GGCCGCCGCA AGTTGAGCTC CATGATATTT GCCTGA
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| Protein sequence | MMDILGGGAS AAPAGDLIKD VTEETFMADV VEASMDVPVV VDFWAPWCGP CKTLGPMLEA
AVTKAKGAVK MAKINVDENQ RLAAALAQQG LPLQSIPTVV GFYQGRPVDM FQGALPQSEI
EAFLQKMAEA AGSTADGGLG EALETAEQML EEGAAADAAQ VFAAILGEDD KNAAAYSGLA
RCHVAMGELD QAEAVLNGAP AEISTAAEIE AAHAQIELAR QAENAGPVAE LRAAVDANPD
DHQARFDLAQ ALHAAGDAEA AVTELLELFR RDREWNEGAA KAQLFTIFEA LKPNDPVVLN
GRRKLSSMIF A
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