| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0048 |
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| Symbol | |
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| ID | 4078711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 51557 |
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| End bp | 52213 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005335 |
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| Product | hypothetical protein |
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| Protein accession | YP_612043 |
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| Protein GI | 99079889 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.434055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA GTGAGATCAA ATCCCGCATT GCCGCTGCCG AATCTGCCGC TGGACGCGTG
CCCGGGTCGG TGGAATTGAT TGCCGTATCC AAAGTGCAGC CCAACGAACG TGTTGAGGCA
GTGTTAGAGG AAGGCCACCG CTGCTTTGGC GAAAACCGTG TGCAAGAGGC CGCAGGCAAA
TGGCCTCAGT TTCGTGAAAA GTTCACTGGC GTGGATCTGC ACCTGATCGG GCCGCTGCAG
ACAAACAAGG CGCGACAGGC GATGGAACTG GTGAATGTGA TCCACTCAGT TGACCGGCCG
AAGCTCGCAA ATGCCTTGGC GCGATTGGCG CAGGAACTCG GCCATTGTCC GGATCTTTTC
ATTCAGGTGA ACACCGGAGA AGAAGAACAA AAGGCCGGTA TCTTGCCTCA GGATGCAGAC
GGCTTTGTTG CGGAATGCCG CAAGCTGGAT CTGCCGATCA AGGGGCTCAT GTGCATCCCG
CCCGTTGATG AAGAGCCGAG CCTGCATTTC GCGCTCCTCG CCAAAATGGC AGAGCGCAAC
GGTCTGAACG GGCTTTCCAT GGGGATGAGC GGAGACTTCG AGAGCGCCAT CGCGCTGGGG
GCGACCCATG TGCGTGTTGG CTCCGCGATC TTCGGGGCGC GTGCCTATTC AGCGTGA
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| Protein sequence | MSLSEIKSRI AAAESAAGRV PGSVELIAVS KVQPNERVEA VLEEGHRCFG ENRVQEAAGK
WPQFREKFTG VDLHLIGPLQ TNKARQAMEL VNVIHSVDRP KLANALARLA QELGHCPDLF
IQVNTGEEEQ KAGILPQDAD GFVAECRKLD LPIKGLMCIP PVDEEPSLHF ALLAKMAERN
GLNGLSMGMS GDFESAIALG ATHVRVGSAI FGARAYSA
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