| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0039 |
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| Symbol | |
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| ID | 4076306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 41146 |
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| End bp | 42195 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005326 |
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| Product | dipeptidase AC |
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| Protein accession | YP_612034 |
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| Protein GI | 99079880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.508075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.304593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTC CGCTTATTTT CGATGGTCAC AACGACCTGC TGCTGCGCCT TCACAATAAA
GATGTAGGAA TGGACCAGGC GGGGGTTTTT GGCAGCGGAG GCCGCCAGAT CGACGTTGAC
AAAGCCAAGG CCGGTGGGTT CGGCGGCGGA TTCTTCGCCA TCTTTGTGCC TGGCGAAGAG
TCGGTCTCCC ATGACGAAGA GATGATGAAG GACACCTATG ACCTGCCGCT TCCAGAGCAG
GTCACGTGGC ACAACGCCAT CAAGGTGGCC CTGTCCCAGG CCGCTCTCCT GATCGAGCTC
GAAAGGCAGG GCGCGCTGCA GATTTGTCGC TCGACCGCAG AAATTCGCAC GGCGATGGAA
CAAGGTCTGA TGGCCGCCGT GATGCATATG GAAGGTGCAG AGGCAATCGA CCGTGATTTC
CACACGCTTG ACGTCCTGCA CGGCGCGGGG CTGCGCTCTC TTGGGCCGGT CTGGAGCCGC
CCAACCCGCT TTGGCCATGG GGTTCCGTTT CGCTATCCCT CCACCGGGGA CACGGGCGAG
GGCCTCACGG AAGATGGGTT TCGCTTGATC AAACGCTGCA ATGAGATGCG GATTATGATC
GATCTCTCGC ACATGACGGA AGCCGGTTTT TGGGACGTGG CCCGCGTCAG TGATGCACCT
TTGGTGGCGA CCCACTCGAA CGCGGTGGCG CTCACCCGGC ATAGCCGCAA CCTGACCGAC
CGCCAGTTGC ATGCGATCCG GGACAGTGAC GGCATGGTCG GGCTGAATTT TGCGGTGGCC
TTCCTGCGCG AAGACGGACG CATGGACGAA AACACACCGA TTTCGCGCAT GTTGGATCAT
CTCGATTACC TCATCGCAGA GGTTGGCGAG GATCGGGTTG GCATGGGCTC GGATTTCGAC
GGGGCAACGG TACCCGCCGA GATCGGCACA ATCGCAGGCC TGCCGGCGTT GCGCCGCGCG
ATGCGGGACC GCGGCTATGA CGATGCTTTG ATGAAGAAAC TCTGCCATGA AAACTGGCTC
CGAGTCCTGG GCAAGACCTG GGGAGAATAA
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| Protein sequence | MNTPLIFDGH NDLLLRLHNK DVGMDQAGVF GSGGRQIDVD KAKAGGFGGG FFAIFVPGEE
SVSHDEEMMK DTYDLPLPEQ VTWHNAIKVA LSQAALLIEL ERQGALQICR STAEIRTAME
QGLMAAVMHM EGAEAIDRDF HTLDVLHGAG LRSLGPVWSR PTRFGHGVPF RYPSTGDTGE
GLTEDGFRLI KRCNEMRIMI DLSHMTEAGF WDVARVSDAP LVATHSNAVA LTRHSRNLTD
RQLHAIRDSD GMVGLNFAVA FLREDGRMDE NTPISRMLDH LDYLIAEVGE DRVGMGSDFD
GATVPAEIGT IAGLPALRRA MRDRGYDDAL MKKLCHENWL RVLGKTWGE
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