| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0037 |
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| Symbol | |
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| ID | 4076304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 38430 |
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| End bp | 39488 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005324 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612032 |
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| Protein GI | 99079878 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0522734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.204601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTT ACAGCAACGT CCCGAAGAGG CAGCCTTGGC TGCCTCTTCC CCCTTGGGCA
AGAAGCATGG GGATCACCCT GCTTTCCGTC TCAATCACCA TGTTGGGGCT CTTGTTCGTC
ACCTTCCTGA TCGGGCGCGT TATGCCTATT GACCCGGTTC TGGCGGTGGT TGGCGAACGC
GCCAGCGAAG AGCAATACAA TGCGGTTTAT CTGGAGCTTG GGCTCGATAA ACAATTGATC
ATACAGTTTT TCTATTACGT CGGCGATGTC CTGCAAGGTG ACTTTGGCAA ATCGCTTCTG
ACCGCGCGCC CGGTGTCAGA GGACATCGCC CGCGTGTTTC CTGCCACCTT TGAGCTTGCA
ACGATTGGCA TTATCTTTGG CTGCGTCCTC GGGGTGCCGC TAGGGGTCAT CGCCGCGGTG
CGCCGTGGCA GTTGGGTGGA TCAGATCGCC CGCGTGGTGG CATTGGTGGG CTATTCGATG
CCGATCTTCT GGCTGGGCCT GATGGGGCTT TTGCTCTTTT ACGGCATGCT CGGCTGGGTC
GGCGGACCGG GGCGGCAGGG CATCTTTTAC GAGGACATGA TCCCCTCCGT AACGGGCATG
ATCCTTGTGG ATTCGATCAT TGCAGGCGAC TGGGGCGCCT TCTGGGATGC GTTTTCACAT
ATCATCCTGC CCGCCTCTCT GCTGGGATAC TACTCCTTGG CCTACATCAG CCGCATGACG
CGTTCGTTCA TGCTGGAACA GCTTTCGGCC GAGTACATCA CCACAGCCCG CGTCAAAGGC
ATGAGCGAAT GGGCGGTGGT CATGAACCAT GCATTCAAGA ATATCCGCGT GCAGCTCATC
ACCGTGATCG CGCTCTCTTA TGCGAACCTC CTCGAGGGAT CGGTGCTGAC GGAGATCATC
TTTTCCTGGC CGGGGATCGG AAACTACATC ACCACGGCAT TGTTGTCGGC TGACATGAAC
GCCGTGCTTG GTGGCACCGT GGTCGTCGGC CTCGTGTTCA TCGTGCTGAA CGTTTTTTCC
GACCTCCTCT ACAAAGTCTT TGATCCGAGG TCGAAATGA
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| Protein sequence | MAFYSNVPKR QPWLPLPPWA RSMGITLLSV SITMLGLLFV TFLIGRVMPI DPVLAVVGER
ASEEQYNAVY LELGLDKQLI IQFFYYVGDV LQGDFGKSLL TARPVSEDIA RVFPATFELA
TIGIIFGCVL GVPLGVIAAV RRGSWVDQIA RVVALVGYSM PIFWLGLMGL LLFYGMLGWV
GGPGRQGIFY EDMIPSVTGM ILVDSIIAGD WGAFWDAFSH IILPASLLGY YSLAYISRMT
RSFMLEQLSA EYITTARVKG MSEWAVVMNH AFKNIRVQLI TVIALSYANL LEGSVLTEII
FSWPGIGNYI TTALLSADMN AVLGGTVVVG LVFIVLNVFS DLLYKVFDPR SK
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