| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0033 |
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| Symbol | |
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| ID | 4076300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 34629 |
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| End bp | 35831 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005320 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_612028 |
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| Protein GI | 99079874 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0463776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0829508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTC TAATCCTGCT CGTGCTTTTG GCCTTTGCGC TTTATTCCTT GTTCAGCAAG
CGGATAGATC GCAGTGTTCT GACCCTGCCT ATCTTGTTTA CAGGGCTTGG GTTTTTGCTC
TCAAAGCCGC TCAGTGAGGT GATCCCCGCC GGGCTTATTC ACGAAGGCAA AGCAGGGCTT
GCGGAGGTGA CGTTGATCCT CGTGCTGTTT TCCGATGCCA GCCACGTGCG ATTGCGCAGC
CTGGCACGGG GCTGGCAGTA TCCGACACGG ATGCTGGTGA TCGGGTTGCC GCTCACCATT
GCCTCGGGCA CGGCGGTTGC ATTCTGGCTC AACCCCAGTT CCGGGCTCGC CGTCGCGCTC
CTGACGGCTG CAGTCTTGAC GCCGACCGAC GCGGCCTTGG GGCAGGCGGT TGTGAACAGC
CCGGATGTCC CGGACCGTCT CGCACAGACG ATCAATGTCG AAAGCGGCCT CAATGATGGG
CTGGTGCTTC CCTTTGTGCT GACGGGGGCG ATACTTGCTT CGGGTTTTGC GGGCGAGGCG
CATACCGCGG GGCTCGCTCT TGAGGCGCTC ATCGAAGTGA TCCTTGGGCC TCTGGCGGGG
ATTGCGGTTG GCTGGGTTGC GGCGCGGGCG ATGGATTGGG CGCAGAACCG TGATCTCATG
CAGGAGGCGG CGGGCGCAGT CGTGTTTCTG GTCACAGCCT TTGCAGCCTA TCTGTTTGCG
GTTCTGATCC ACGGAAACGG TTTTATCGCG GCATTTGTCG CGGGCATGGT GTTCGGCAAC
AGCTATCGTC ACAACATTCA TTTCATAAGC GAGTTCATGG AGGGCGCGGG ACAGTTGCTC
ACGATGGCCG CCTTTCTGGT GTTCGGCGCA TTCCTGTTGC CAGACGGGCT GGCTCATGCG
GGCGTCTCCA CTTTGGTCTT GGCGCTCTTG TTTTTGACGG TAGTTCGCAT GGGGCCGATC
CTCCTGTCGC TCATCGGAAG CGGCCTTCCC ACACGCGAGA AACTATTTCT GGGCTGGTTT
GGCCCGCGCG GCCTCGCTTC GATCCTGTTC ACACTGTTGA TGATGGATCA GTTCGACATC
CCAAATGAGG AGGAGCTGCT CGCCTGTGTT TCTCTGACGG TCGGACTGTC GATCCTCCTG
CATGGTATCA CATCCACGCC GCTTGCCAGT TGGATCAGTC AGGAGGGCAA GCGCAACACA
TGA
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| Protein sequence | MTFLILLVLL AFALYSLFSK RIDRSVLTLP ILFTGLGFLL SKPLSEVIPA GLIHEGKAGL
AEVTLILVLF SDASHVRLRS LARGWQYPTR MLVIGLPLTI ASGTAVAFWL NPSSGLAVAL
LTAAVLTPTD AALGQAVVNS PDVPDRLAQT INVESGLNDG LVLPFVLTGA ILASGFAGEA
HTAGLALEAL IEVILGPLAG IAVGWVAARA MDWAQNRDLM QEAAGAVVFL VTAFAAYLFA
VLIHGNGFIA AFVAGMVFGN SYRHNIHFIS EFMEGAGQLL TMAAFLVFGA FLLPDGLAHA
GVSTLVLALL FLTVVRMGPI LLSLIGSGLP TREKLFLGWF GPRGLASILF TLLMMDQFDI
PNEEELLACV SLTVGLSILL HGITSTPLAS WISQEGKRNT
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