| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0016 |
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| Symbol | |
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| ID | 4078679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 17017 |
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| End bp | 18000 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005303 |
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| Product | UDP-galactose 4-epimerase |
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| Protein accession | YP_612011 |
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| Protein GI | 99079857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00490558 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.701092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATG TGCTGGTCAC AGGAGGGGCG GGCTACATTG GCTCGCACGC ATGTAAAGCT
CTGAAACAGG CAGGCTATAC GCCAGTCACA TATGACAATC TGGTCACGGG CTGGCAGGAT
GCGGTGAAGT TCGGCCCCTT CGAACAAGGC GATCTGACCG ACCGGGGCCG CCTTGATGAG
GTGTTTGCAC AATATAAACC TGTGGCCGTG ATGCATTTTG CAGCCCTGAG CCAGGTGGGC
GAGGCGATGT CCGAGCCGGG ACGGTATTGG GCGAACAATG TTGGCGGCTC GCTCTGCCTG
ATTGAGGCAG CCGTGGCGGC AGGGTGTCTG GATTTCGTCT TTTCGTCCAC CTGCGCGACA
TATGGCGAGC ACGACAATGT GGTTCTGGAC GAGAATACTC CGCAGCAGCC TTTAAATGCC
TATGGTGCGT CCAAGCGGGC GGTCGAGGAT ATCTTGAAAG ACTTCGAAGC CGCGCATGGC
CTGCGCAGCG TGATCTTTCG GTATTTCAAT GTCGCGGGCG CAGATCCTGA GGCCGAGGTG
GGAGAGTTCC ACCAGCCTGA AACCCATTTG GTGCCACTGA TGATTCAGGC GATCAAAGGC
GAGCGGGCGG CGCTTACTGT GTTTGGGACC GACTATGACA CCCCAGATGG CACCTGCATT
CGCGACTATG TCCATGTCTG CGATTTGGTG GATGCTCATA TCCTTGGCCT GAAATGGCTT
GAGGATGGCA AAGGCAGCCG CGTGTTCAAC CTTGGCACCG GCACCGGGTT TTCCGTCAAG
GAAGTGCTGT CGCATTCTCA TGCCGTAACG AATACCGAAG TGCCGCATGT CATCGGCCCG
CGCCGTGCGG GCGACTGTAC CAAGCTGGTG TCCGGCTCGG TGCGCGCCGG AGAGGAACTG
GGCTGGGAGC CGAAGCGCTC CACCATGGAC CAGATGATCT CTGACGCATG GCGCTGGCAC
CAAAGCGGCC ACTACGAGCG CTGA
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| Protein sequence | MANVLVTGGA GYIGSHACKA LKQAGYTPVT YDNLVTGWQD AVKFGPFEQG DLTDRGRLDE
VFAQYKPVAV MHFAALSQVG EAMSEPGRYW ANNVGGSLCL IEAAVAAGCL DFVFSSTCAT
YGEHDNVVLD ENTPQQPLNA YGASKRAVED ILKDFEAAHG LRSVIFRYFN VAGADPEAEV
GEFHQPETHL VPLMIQAIKG ERAALTVFGT DYDTPDGTCI RDYVHVCDLV DAHILGLKWL
EDGKGSRVFN LGTGTGFSVK EVLSHSHAVT NTEVPHVIGP RRAGDCTKLV SGSVRAGEEL
GWEPKRSTMD QMISDAWRWH QSGHYER
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