Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0015 |
Symbol | |
ID | 4078678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 16023 |
End bp | 16916 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638005302 |
Product | UDP-glucose pyrophosphorylase |
Protein accession | YP_612010 |
Protein GI | 99079856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000637346 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAGAA AAGTTACAAA AGCTATTTTC CCTGTTGCCG GTCTTGGCAC GCGTTTTTTG CCTGCCACGA AGTCTGTGCC CAAAGAGATC ATGACTCTCG TTGACCGGCC TCTCGTGCAA TATGCCATCG ACGAGGCGCG CGCTGCTGGC ATCAAGGAAT TCATCTTTGT GACATCTCGC GGCAAAGGAG CGCTTGAAGA CTATTTCGAC CACGCGCCTG TTCTGGAACA GGAACTGCGC AAAAAGGGCA AGGATCAGCT TCTCGAAGTT CTCAAGGCGA CCAATATGGG ATCAGGAGAT ATTGCCTATA TTCGTCAGCA CAAGGCGCTG GGCTTGGGCC ATGCGGTCTG GTGCGCGCGC CGTCTGATCG GGGATGAGCC ATTTGCGGTG ATGCTGCCTG ACGATGTGAT CGCGGCCGAC AAGCCCTGCC TTCAGCAGAT GGTCGAAGCC TATGCTGAAA CCGGCGGCAA CATGGTGGCA GCGATGGAAG TTGCGCCAGA GAAAACGTCG TCTTACGGGA TCCTCGACGT CAAGGATAGC AAGGATGCCG TGATGCCGAT CAATGCGATG ATCGAAAAGC CGAGCCCCGA AGAAGCGCCC TCGAACCTCG CAGTGATCGG GCGTTATATT TTGTCGCCTT CGGTGCTTCA GAATCTCAAT AAGCGCAAAC AAGGGGCGGG CGGGGAGATC CAACTGACCG ACGCGATTGC GGAGGATATT GCGCGGGACG TGCCGGTTTG TGGCTACCGT TTCAAAGGGC GCCGCTTTGA TTGTGGCTCC AAGTCTGGGT TCTTGCAGGC TACGGTCGCC TTTGCGTTGG AACGTGAAGA ACTGCGCGAT GATCTCATGG AGTATCTTTC GACCCTGTCG GCCCATCGAC AGGCTGCTGA ATAA
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Protein sequence | MPRKVTKAIF PVAGLGTRFL PATKSVPKEI MTLVDRPLVQ YAIDEARAAG IKEFIFVTSR GKGALEDYFD HAPVLEQELR KKGKDQLLEV LKATNMGSGD IAYIRQHKAL GLGHAVWCAR RLIGDEPFAV MLPDDVIAAD KPCLQQMVEA YAETGGNMVA AMEVAPEKTS SYGILDVKDS KDAVMPINAM IEKPSPEEAP SNLAVIGRYI LSPSVLQNLN KRKQGAGGEI QLTDAIAEDI ARDVPVCGYR FKGRRFDCGS KSGFLQATVA FALEREELRD DLMEYLSTLS AHRQAAE
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