| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0014 |
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| Symbol | |
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| ID | 4078677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 15072 |
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| End bp | 15872 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005301 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_612009 |
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| Protein GI | 99079855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0032513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.963586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTC TGATTGTCAT TCCCGCGCGT TACGCCTCTA CACGGTTTCC CGGCAAGCCT
TTGGCTGAAC TGACTGGCGC AACAGGTAAG ACGCGGTCGC TTATCGAGCG CTCCTGGCGT
GCGGCCTGCG CCGTGAATGG CGTGGACCGC GTGGTGGTTG CAACAGATGA CGATCGCATC
AAAGCGGCGT CAGAAACCTT CGGGGCTGAG GTCGTAATGA CCTCAGAGAC ATGCGCCAAT
GGCACCGAGC GCTGCGCCGA GGCGCATGCA GCCCTCGGGG GAGGCTATGA GGTGGTGGTG
AACCTTCAGG GCGACGCCCC ACTGACACCG CCTTGGTTCA TCGAGGATCT GATCAATGGC
CTTCAGGCGG CAGAAGGAAT GGGGCTGGCG ACGCCCGTGC TGCGCTGCGA TGGCGCCACG
CTCAACAGCT TGCTGGAGGA TCGCCGTGCT GGGCGCGTTG GGGGAACCAC TGCGGTCTTT
GGGGCAGACC ATAGCGCGCT CTATTTTTCC AAGGAAGTGA TCCCATTCCA GTCTGGCAGG
TATTCTGACG CAGAGTGCAC TCCAGTCTTT CATCACGTTG GCGTATACGC CTACCGCCCG
GACGCGCTTC TGGCCTATCC CACGTGGCCA GTTGGTCCGC TTGAGACACT AGAAGGCCTC
GAACAGCTGA GGTTCCTGGA GAATGGCCGT AAGATTCTCT GTGTCGAAGT CGATGCAAGA
GGACGGGAGT TCTGGGAGCT GAACAACCCA GAAGATCGGC CGAAAATCGA AGAAATGATG
CGAAAAATGG GCGTCGAATA G
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| Protein sequence | MSVLIVIPAR YASTRFPGKP LAELTGATGK TRSLIERSWR AACAVNGVDR VVVATDDDRI
KAASETFGAE VVMTSETCAN GTERCAEAHA ALGGGYEVVV NLQGDAPLTP PWFIEDLING
LQAAEGMGLA TPVLRCDGAT LNSLLEDRRA GRVGGTTAVF GADHSALYFS KEVIPFQSGR
YSDAECTPVF HHVGVYAYRP DALLAYPTWP VGPLETLEGL EQLRFLENGR KILCVEVDAR
GREFWELNNP EDRPKIEEMM RKMGVE
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