| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0008 |
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| Symbol | radC |
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| ID | 4078671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 8429 |
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| End bp | 9205 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005295 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_612003 |
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| Protein GI | 99079849 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0728991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.408285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAT CAGAACGCTT TGAGGAAGAT ATGCTGCCCC TCTTTGAGGG CGCGAATGGC
GACAGTGACG AGGCGCCTCT CCTGCCCATC ATGCAGGGGC GGATCCCATC CTATATCAGA
GATCATCGCG CCCGTTTACG CGAACGCTTT ATGAGCGCAG GGGCAATCGG CCTGCCGGAC
TATGAACTCC TGGAGCTGAT CCTCTTTCGC TCCATTCCAC GCAAGGACGT GAAGCCCTTG
GCGCATCAGC TTCTTGCCAG TTTTGGCGAC CTCAACCGCG TTGTGACCGC CTCTCCGGAG
CGGCTCGCTG AGGTGCAAGG CATCGGACAG GCTGTAATCT GCGATCTCAA GATCTTTGAG
GCCGCAGCGC AGCGCATGGC GCGATCGCGT GTCCTTCAAC GCCAGGTGAT CGCAAGCTGG
GATGCACTGC TGGATTACTG CCATACAGCA ATGGCACATC GTGAGACAGA GCAGTTCCGC
GTGCTCTATC TCGACCGAAA GAACATCTTG ATCGCGGATG AAGAACAGGC TCGCGGCACC
GTGGATCACG TCCCGGTTTA TCCGCGAGAG GTTGCAAAAC GGGCGCTGGA GCTCAACGCC
AGCGCCCTGA TTTTAGTCCA CAATCATCCG TCAGGCGATC CGACCCCCTC TCAGGCGGAT
ATCGGCATGA CCCGCAAGGT GGGGGCCGCC CTCGGCGCAC TCGACATCAC GCTTCATGAC
CACCTGATCA TCGGAGCGTC GGACGAGCTG TCCTTTCGCT CCGAAGGCCT GCTTTAG
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| Protein sequence | MGKSERFEED MLPLFEGANG DSDEAPLLPI MQGRIPSYIR DHRARLRERF MSAGAIGLPD
YELLELILFR SIPRKDVKPL AHQLLASFGD LNRVVTASPE RLAEVQGIGQ AVICDLKIFE
AAAQRMARSR VLQRQVIASW DALLDYCHTA MAHRETEQFR VLYLDRKNIL IADEEQARGT
VDHVPVYPRE VAKRALELNA SALILVHNHP SGDPTPSQAD IGMTRKVGAA LGALDITLHD
HLIIGASDEL SFRSEGLL
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