| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0006 |
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| Symbol | |
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| ID | 4078669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 5336 |
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| End bp | 5929 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005293 |
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| Product | NAD(P)H dehydrogenase (quinone) |
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| Protein accession | YP_612001 |
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| Protein GI | 99079847 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0938548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.382985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC GAAAGATTCT CGTTCTGAAT GGCCACCCCG GTCAAAATTC GCTCAATAAA
TCCCTTGCCG ATGCCTATCG GCGTGCTGCC GAAGCCGCCG GGCATGAGTT GCGGTATCAG
GATCTGTCCC AGATGCAGTT CGATATGGAT TTTGGCGAGG GGGGCTATCA CGACACAAAG
CCGTTGGAGC CCGCGCTGCA ATCCTTTGTG GCAGATCTCG AATGGGCGGA GCATCTGGTG
GTGACCACGC CACTTTGGTG GGGGGCGTTC CCAGCAAAAC TCAAAGGTCT GTTTGACCGG
GCGCTGTTGC CGGGGCAGGC GTTTGACACG CGCAACACAA ACGCCTTTGG TGTGCCTGCG
CCGATGATGA CCGGCAAGAC CGCACGCGTC ATGCTGACCA GCGACACGCC GTCCTGGTTC
CTGCGTCTGC TCTACGGCAA TGCCATCAAG AAGATCATGT CACGTCAAAT CCTCGGCTTT
GTCGGCATCA AGCCTGTGCG CTACACCAGC TTTGCGGCGG CCTCACATCC CAAGCCCGGA
CAGGCGGATC AATGGCTGAA AACAGTGGCT AATCTGGGGC GTGCGGCAGC GTGA
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| Protein sequence | MSTRKILVLN GHPGQNSLNK SLADAYRRAA EAAGHELRYQ DLSQMQFDMD FGEGGYHDTK
PLEPALQSFV ADLEWAEHLV VTTPLWWGAF PAKLKGLFDR ALLPGQAFDT RNTNAFGVPA
PMMTGKTARV MLTSDTPSWF LRLLYGNAIK KIMSRQILGF VGIKPVRYTS FAAASHPKPG
QADQWLKTVA NLGRAAA
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