| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3762 |
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| Symbol | |
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| ID | 4075470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 816768 |
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| End bp | 817871 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005283 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_611991 |
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| Protein GI | 99078733 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC CATCGATTCT GATTTTGCCC GGTGACGGCA TCGGCCCCGA AGTGATGGCC
GAGGTCAGAA AGGTCATTTC CTGGTTCGGC GCCAAGCGCG ATATTCAGTT CGATGTGAGC
GAAGATCTGG TTGGCGGCTC TGCCTATGAC GCCCATGGCA CGCCCCTGCA TGACGATACC
ATGGCAAAGG CGCAAGAGGT GGACGCTGTG CTTCTCGGCG CGGTGGGTGG CCCGAAATAC
GACGCACTCG ATTTCTCGGT AAAGCCCGAG CGCGGCCTTC TGCGCCTGCG CAAGGAAATG
GATCTTTATT CCAACCTGCG TCCGGCCCAG TGCTTTGATG CGCTGGCGGA TTTCTCCTCG
CTCAAGAAGG ACGTCGTGGC CGGGCTCGAT ATCATGATCG TGCGCGAACT GACCTCCGGG
ATCTACTTTG GCGAGCCGCG CGGCATCATC GAAGAAGGCA ACGAGCGCGT TGGCATCAAC
ACCCAGCGCT ATACCGAATC CGAGATCGAG CGTGTTGCGC GTTCGGCGTT TGAACTGGCC
ATGCGTCGCG GCAAGAAACT CTGCTCGATG GAAAAAGCCA ACGTGATGGA GAGCGGCATC
CTGTGGCGCG AAGTTGTCAC CGAGGTGAGC AAGGACTACC CCGAGGTGGA ACTTTCGCAC
ATGTACGCGG ATGCCGGTGC CATGCAGCTC TGCCGCTGGC CCAAGCAGTT TGACGTGATT
GTCACCGACA ATCTCTTTGG CGATCTGCTT TCCGATGCTG CGGCCATGCT GACGGGATCC
TTGGGCATGC TCCCCTCCGC GTCGCTTGGC GCGCCGATGG CCAATGGTCG CCCCAAGGCG
CTTTATGAGC CCGTGCACGG CTCGGCCCCT GACATCGCCG GTCAGGGCAA GGCCAACCCG
ATTGCCTGCA TCCTCTCTTT TGCCATGGCG CTGCGCTACA GCTTTGACAT GGGCACCGAG
GCGGACCGCC TTGAAGCGGC TGTCGAGAAA GTGCTCGCCG ATGGCGTGCG CACCGCGGAC
CTTCTGGGCG AAGAGGGCGT GACCCCGGTC AGCACCTCCG AGATGGGCGA TGCCGTGGTC
GAGGCGCTCA ACGCAAGCCT CTAA
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| Protein sequence | MSNPSILILP GDGIGPEVMA EVRKVISWFG AKRDIQFDVS EDLVGGSAYD AHGTPLHDDT
MAKAQEVDAV LLGAVGGPKY DALDFSVKPE RGLLRLRKEM DLYSNLRPAQ CFDALADFSS
LKKDVVAGLD IMIVRELTSG IYFGEPRGII EEGNERVGIN TQRYTESEIE RVARSAFELA
MRRGKKLCSM EKANVMESGI LWREVVTEVS KDYPEVELSH MYADAGAMQL CRWPKQFDVI
VTDNLFGDLL SDAAAMLTGS LGMLPSASLG APMANGRPKA LYEPVHGSAP DIAGQGKANP
IACILSFAMA LRYSFDMGTE ADRLEAAVEK VLADGVRTAD LLGEEGVTPV STSEMGDAVV
EALNASL
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