Gene TM1040_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3761 
Symbol 
ID4075469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp815638 
End bp816594 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content57% 
IMG OID638005282 
Producthypothetical protein 
Protein accessionYP_611990 
Protein GI99078732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA AGGCAGCTTT TATGGCCTTG CTGGCCTATG GCATTTTCTC CACCCATGAT 
GTTGTGGTGA AATTCATCAG CGCAGAGGTC TCCGCTTTTC AGATTGTCTT TTTCTCCAGC
CTTCTGTCGT TTCCGCTTCT GACCTTGATG ATCGTGAAGG ACGCAACGCC GGGGACATTC
CGCCCCAATC AGCCAGGCTG GGTGGCGCTG AGGTCGCTGA TGATGGCGCT GATCCCGGGC
TGCGCCTTTT ATGCGTTTTC GGTGCTTCCG CTGGCGCAAA CTTATGCGTT GCTGTTTGCA
ACGCCCTTTC TCATCACGCT TTTGTCCATC CCGATGCTGG GCGAAAAAGT CGGGTTGCCG
CGGATGGCGG CGGTCATCGT TGGGTTTGCC GGCGTTCTTG TGGTCTTGCG CCCCGGCGGA
ACCGAACTCG GCCTAGGTCA CGTCGCTGCG CTTTTGGCGG CTTTTGGCAA TGCGTTTCAG
TCCGTTATCC TGCGCAAGCT GCGACACACG GAGCGCCGCG TGGTCCTGAT GCTGTTTCCG
ATCCTGACCA CGGTTGTGAT CATGGGTCTG ACCATGCCCT TCGTCTATGT CCCCCTGAGC
GGCACGCAGA TGGGAGGTTT GGCGATCATT TCGGTGTTCG GCTTCTGCGC CACCTTGCTG
CTGGTCTTTT CCTACTCCAT CGGCGAGTCG GCGGTGGTCG CGCCAATGCA ATATTCCCAA
ATCATTTGGG CCATCGTGTT TGGCGCTCTC CTCTTTGATG AGACCGTGGA CCTTCTGACG
ATCCTCGGCG CGGGGATCAT CATCGCAAGC GGCGTTTTCA TCGTCATGAG AGAAGCCCGT
GGCGGGCGAT CCTCGACGAC ACCGGTGCTT CAGTCGCGTA GCCGGCCGAT GCTCAGCAGC
GGCTTTGGCC TTTCCAATCT GGCCAAAGCC AAATTCGATG AGAAAGGCTC TGAATAG
 
Protein sequence
MNMKAAFMAL LAYGIFSTHD VVVKFISAEV SAFQIVFFSS LLSFPLLTLM IVKDATPGTF 
RPNQPGWVAL RSLMMALIPG CAFYAFSVLP LAQTYALLFA TPFLITLLSI PMLGEKVGLP
RMAAVIVGFA GVLVVLRPGG TELGLGHVAA LLAAFGNAFQ SVILRKLRHT ERRVVLMLFP
ILTTVVIMGL TMPFVYVPLS GTQMGGLAII SVFGFCATLL LVFSYSIGES AVVAPMQYSQ
IIWAIVFGAL LFDETVDLLT ILGAGIIIAS GVFIVMREAR GGRSSTTPVL QSRSRPMLSS
GFGLSNLAKA KFDEKGSE