Gene TM1040_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3748 
SymbolgreA 
ID4075455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp806339 
End bp806809 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID638005268 
Producttranscription elongation factor GreA 
Protein accessionYP_611977 
Protein GI99078719 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TCCCGATGAC GCCGCAGGGC TTTCACGCCC TCGAAGCAGA ACTGAAGAAC 
CTCAAAAGCG TGGAGCGCCC GGCGATCATT CAGGCCATCG CCGAAGCCCG CGAGTTGGGC
GATCTGTCGG AAAACGCAGA ATATCACTCT GCGCGTGAGA AGCAGTCCTT CATCGAAGGC
CGCATCAAGG AGCTCGAGGG CGTCTTGTCT CTGGCCGATG TTATCGATCC GTCAAAGCTC
TCCGGTGCGA TCAAATTCGG CGCCAAGGTC ACCGTGGTCG ACGAAGACAC CGATGAAGAG
AAAACCTGGC AGATCGTTGG CGAACACGAG GCGAATATCG AAGCGGGTCT TTTGAATGTG
AAATCTCCGA TTGCACGCGC CTTGATCGGC AAGGAAGAAG GCGACAGTGT AGAAGTGCGC
ACGCCCGGTG GTGATCGCTC CTACGAAATT CTGGACATCA CTTACGGTTA A
 
Protein sequence
MDKIPMTPQG FHALEAELKN LKSVERPAII QAIAEARELG DLSENAEYHS AREKQSFIEG 
RIKELEGVLS LADVIDPSKL SGAIKFGAKV TVVDEDTDEE KTWQIVGEHE ANIEAGLLNV
KSPIARALIG KEEGDSVEVR TPGGDRSYEI LDITYG