Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3748 |
Symbol | greA |
ID | 4075455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 806339 |
End bp | 806809 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638005268 |
Product | transcription elongation factor GreA |
Protein accession | YP_611977 |
Protein GI | 99078719 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA TCCCGATGAC GCCGCAGGGC TTTCACGCCC TCGAAGCAGA ACTGAAGAAC CTCAAAAGCG TGGAGCGCCC GGCGATCATT CAGGCCATCG CCGAAGCCCG CGAGTTGGGC GATCTGTCGG AAAACGCAGA ATATCACTCT GCGCGTGAGA AGCAGTCCTT CATCGAAGGC CGCATCAAGG AGCTCGAGGG CGTCTTGTCT CTGGCCGATG TTATCGATCC GTCAAAGCTC TCCGGTGCGA TCAAATTCGG CGCCAAGGTC ACCGTGGTCG ACGAAGACAC CGATGAAGAG AAAACCTGGC AGATCGTTGG CGAACACGAG GCGAATATCG AAGCGGGTCT TTTGAATGTG AAATCTCCGA TTGCACGCGC CTTGATCGGC AAGGAAGAAG GCGACAGTGT AGAAGTGCGC ACGCCCGGTG GTGATCGCTC CTACGAAATT CTGGACATCA CTTACGGTTA A
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Protein sequence | MDKIPMTPQG FHALEAELKN LKSVERPAII QAIAEARELG DLSENAEYHS AREKQSFIEG RIKELEGVLS LADVIDPSKL SGAIKFGAKV TVVDEDTDEE KTWQIVGEHE ANIEAGLLNV KSPIARALIG KEEGDSVEVR TPGGDRSYEI LDITYG
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