| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3743 |
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| Symbol | |
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| ID | 4075450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 800506 |
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| End bp | 801330 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005263 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_611972 |
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| Protein GI | 99078714 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.257407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA CTGAGGTTTT TGCGCCGGCC AAGGTAAACC TTTCCCTGCA TGTGACGGGG
CGCCGCGCAG ATGGGTATCA CCTGCTGGAC AGTCTGGTTG CATTTGCAAG CATAGGCGAC
CGATTGCGCC TGTCCCCGGC TGAGGAGCTT TCGCTTTCTG TTTCGGGGCT TTTTGCGGAC
GGGGTCCCGG AGGACTCGCG TAATCTGGTC TGGCGCGCCG CCGAAGGCGC GGATTGGCGC
GGGCATATCG GGCTGGAGAA ATCTCTGCCT CATGGGGCGG GTATCGGCGG CGGCTCTTCT
GATGCGGGTG CTGTTTTGAA CGCATTTCGA TCGCAGGGAC ACACTGTGCC AAAAGCCTTG
GCCTTGTCGC TTGGGGCGGA TGTTCCGGTC TGCATGCATG CCTCAGCCGC GCGGATGCAG
GGGATCGGCG AGGAGATCAC TCCGATCCCG CTGCCCAAAC TGCCCGCGCT ATTGGTGAAC
CCCGGCGTTG AAGTGCCCAC GGGGGCGGTG TTCTCCGGGC TTGCGTCGCG TGAGAATGAC
CCTATGCCCT CGGAGGTCCC ACGTTTTGAC GGTGTCGCGG ATTGTGCGGG ATGGCTCGGA
GCGCAGCGCA ACGATCTGGA ACCCGCAGCG ATCGCGGCGG CCCCCCTGAT CGAGCGCGTT
CTGAGTGATC TGCGTGCCTC TCGCGCTGCG CTTCTGGCCC GAATGTCGGG GTCCGGATCG
ACATGCTTTG CGATCTACCC GACGTTGAAG GCGGCGCATT TTGCAGCCTA TGAGATCGGC
GCAGAGCACC CAGAGTGGTG GTGTGTGGCA ACCGAACTCA GCTGA
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| Protein sequence | MTITEVFAPA KVNLSLHVTG RRADGYHLLD SLVAFASIGD RLRLSPAEEL SLSVSGLFAD
GVPEDSRNLV WRAAEGADWR GHIGLEKSLP HGAGIGGGSS DAGAVLNAFR SQGHTVPKAL
ALSLGADVPV CMHASAARMQ GIGEEITPIP LPKLPALLVN PGVEVPTGAV FSGLASREND
PMPSEVPRFD GVADCAGWLG AQRNDLEPAA IAAAPLIERV LSDLRASRAA LLARMSGSGS
TCFAIYPTLK AAHFAAYEIG AEHPEWWCVA TELS
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