Gene TM1040_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3740 
Symbol 
ID4075447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp798374 
End bp799162 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID638005260 
Productmethyltransferase small 
Protein accessionYP_611969 
Protein GI99078711 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGC CTCAAAGCTT TGCACAAGAC GAGCTGAGCC TCGACGCGTT TTTGGGCGGC 
CAGATCAAAC TCTTGCAACC CAAGAGCGGG TATCGTGCGG GCGTTGATCC GGTGCTGTTG
GCGGCCGCTG TCAACGCGAA ATCCGGCGAT TCTGTGCTGG AGCTGGGTTG TGGGGCAGGG
CAGGCGTTCT TGTGTCTGGC GGCGCGGGTT TCGGGCCTCT CGATTGTCGG TGTGGAATTG
CAACCTGCCT ATGCCGAGCT TGCGCGCCGA AATGCCGCAG TCAACGCCGT TCCGGCAGAG
GTCGTCGTAG CCGATCTGAG CAATCTGCCA GCCACATTGC GCCAACGGCG GTTTTCGCAT
GTGATCGCCA ATCCGCCCTA TTATCGCGCG GGCGCGCACA GCCAGGCCAA GGACCCAGGT
CGCCGTACCG CGCTCGGCGA AGGCACGCCG CTTGAGCTCT GGTTCGATGT CGCCGCGCGC
AGGCTTACCC CAAAGGGCTA TTTGCACATG ATCCAGCGGG TCGAACGTCT ACCGGACATG
ATTGCCGCAG CGCAAGGACG GCTTGGCTCA CTCGAAGTGC TGCCGCTTTC ACCACGTGTT
GGGCGCGCAA CCGAACTCGT AATTTTGAGG GCTCGCAAAG GCGGGCGCGC AGAGTTTCGA
CTGCACGCCC CTTTGGTGAT GCATCAAGGC GACGCCCATC ACCGGGATGG CGAGGATTAT
AGTCCAGCGG TGCGCGCGGT TCTGCGCGAA GGTAGCGCGT TGCCCTGGCC CGACATCGGA
CGCAACTGA
 
Protein sequence
MAEPQSFAQD ELSLDAFLGG QIKLLQPKSG YRAGVDPVLL AAAVNAKSGD SVLELGCGAG 
QAFLCLAARV SGLSIVGVEL QPAYAELARR NAAVNAVPAE VVVADLSNLP ATLRQRRFSH
VIANPPYYRA GAHSQAKDPG RRTALGEGTP LELWFDVAAR RLTPKGYLHM IQRVERLPDM
IAAAQGRLGS LEVLPLSPRV GRATELVILR ARKGGRAEFR LHAPLVMHQG DAHHRDGEDY
SPAVRAVLRE GSALPWPDIG RN