Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3730 |
Symbol | |
ID | 4075437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 789027 |
End bp | 789482 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005250 |
Product | hypothetical protein |
Protein accession | YP_611959 |
Protein GI | 99078701 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.808369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAGT TTCTTGTCGT GTTGGACGAC AGCCGAGAAT GCCTGAATGC GATGCGCTTT GCCGCGATGC GCGCCGCCAA TACTGGCGGT GGCGTCGTCA TCCTGTCGGT GATCCCGCCG GATGAATTCA ATCACTGGAT CGGGGTCGGT GAAGTCATGC GTGAAGAGGC GCGCGAACGG ATTCATGCGC ATTTTGAGGT CTTCGCGAAA TGGATGCGCG ACCGGCAGGG CGTGGACCCG GAACTGGTGA TCCGCGAAGG CGATACGGTT CCCGAAATCC TCGCCCAGAT CGAAGCGGAT CCCGAGGTGG GTGTTCTGGT GCTGGGCGCG GCCAGCGATC GCAAGGGCCC CGGCCCGATC GTGACACAAC TGACCCGGAC GGCAGGCACG CTGCCGTTTC CGATCACAAT TGTGCCTGGC GATATGTCGA AAGAGCGGCT TGAAGCAATC ACCTGA
|
Protein sequence | MRKFLVVLDD SRECLNAMRF AAMRAANTGG GVVILSVIPP DEFNHWIGVG EVMREEARER IHAHFEVFAK WMRDRQGVDP ELVIREGDTV PEILAQIEAD PEVGVLVLGA ASDRKGPGPI VTQLTRTAGT LPFPITIVPG DMSKERLEAI T
|
| |