| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3728 |
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| Symbol | |
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| ID | 4075435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 786791 |
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| End bp | 787861 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005248 |
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| Product | ferredoxin |
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| Protein accession | YP_611957 |
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| Protein GI | 99078699 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | [TIGR02008] ferredoxin [2Fe-2S]
[TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.600358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCT TTCACCCTCT CGAAGTCACC GACATCAAGA AAACCATCCG CGACGCGGTT
GTGGTCACGC TGAAGCCCCT CAATGGTGCG GCTGCGGAGT TCGACTTTAC CCAAGGCCAA
TATCTGACGT TCCGGCGTGA TTTTGACGGC ACCGAGCTGC GCCGCAGCTA TTCGATCTGT
GCGGGCAAGG ACGAAGGCAT CCTGCAGGTC GGCATCAAGC GCGTGGATGG CGGGGCCTTT
TCCACCTGGG CCAATACGGT CCTCAAGGTC GGTGACACGG TCGAAGCGAT GCCGCCGCAG
GGGCGGTTTT TCACCGATCT CGATGCCGCC GCCGAGAAAC ACTATCTCGG CTTTGCCGGG
GGCTCTGGCA TCACGCCGGT GCTGTCGATC CTGAAGACCA CCCTGCAGGC AGAGCCTCAG
TCTCGTTTCA CGCTGGTCTA CGCCAACAAG GGCATCAACT CGATCATGTT CCGCGAGGAA
ATCGAGGATC TGAAGAACCG CTACATGGGG CGCCTGTCCG TCATTCATGT GCTGGAAACA
GATGCGCAAG AGGTCGATCT CTTCACCGGT CTGGTGACGC AGGAGAAATG CGCCGAGCTG
TTTGAGCGCT GGATTCCGAT CCAGAGCGTC GACACGGCGT TTATCTGTGG ACCCGAACCG
ATGATGCTCG GCATAGCCGA AGCCCTGCGC ACGGCAGGGC TCTCGGATGA GCAGATCAAG
TTCGAGCTCT TCGCGTCCAA TCAGCCGGGG CGGGCTGCAA AGAAGGCCAC AAGTGGTGAT
GCAGCGGCCA GCGCCCCGGT CACGGCGGCG ATCACGCTGG ATGGGGCCAC GCGCTCTGTC
ACCCTGGATC GCAATACCAG CGTTCTGGAA GCCGCTCTGG AAAATGCGAT GGACGCGCCC
TGGTCCTGTC GGGCGGGCGT GTGTTCCACC TGCCGCTGCC GCGTCATCGA GGGCGAGGTC
GAAATGGCCG CGAACCATGC GCTTGAAGAT GACGAAGTGG CCAAAGGCTT CGTGCTCTCC
TGCCAAGCTT ACCCGCTGAG CGACGCCCTT GTGGTGAGCT ACGACGAGTA G
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| Protein sequence | MARFHPLEVT DIKKTIRDAV VVTLKPLNGA AAEFDFTQGQ YLTFRRDFDG TELRRSYSIC
AGKDEGILQV GIKRVDGGAF STWANTVLKV GDTVEAMPPQ GRFFTDLDAA AEKHYLGFAG
GSGITPVLSI LKTTLQAEPQ SRFTLVYANK GINSIMFREE IEDLKNRYMG RLSVIHVLET
DAQEVDLFTG LVTQEKCAEL FERWIPIQSV DTAFICGPEP MMLGIAEALR TAGLSDEQIK
FELFASNQPG RAAKKATSGD AAASAPVTAA ITLDGATRSV TLDRNTSVLE AALENAMDAP
WSCRAGVCST CRCRVIEGEV EMAANHALED DEVAKGFVLS CQAYPLSDAL VVSYDE
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