| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3724 |
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| Symbol | paaA |
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| ID | 4075431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 784063 |
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| End bp | 785055 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005244 |
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| Product | phenylacetate-CoA oxygenase subunit PaaA |
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| Protein accession | YP_611953 |
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| Protein GI | 99078695 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.802749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCGC AGATGGTCAA ATCGACCGGC ACGGGAGTTA AATCTACCGA GGAAATGAGC
GCCGAAGAGC GCGCGTTTCA GGCCCGTATC GATGCGGGCG AAAAAATCGA GCCGAAAGAC
TGGATGCCCG AGGGCTATCG CAAGACGCTG ATCCGCCAGA TCGGCCAGCA CGCGCATTCC
GAGATTGTCG GCCAGCTGCC CGAGGGCAAC TGGATCACCC GCGCACCGAC GCTGGAACGC
AAGGCGATCC TGCTGGCGAA AGTACAAGAC GAGGCGGGCC ACGGGCTCTA TCTCTACTGT
GCCGCTGAAA CGCTGGGCGT CAGCCGTGAC GAGATGACCG AGATGCTCTT GGACGGGCGG
ATGAAGTATT CGTCGATCTT CAACTATCCG ACCCTGACAT GGGCCGATAT GGGTGCTGTC
GGCTGGCTCG TGGATGGCGC GGCGATCATG AACCAGGTGC CGCTGCAGCG CACCTCCTTT
GGCCCCTATT CGCGTGCGAT GATCCGGGTG TGCAAGGAAG AGAGTTTTCA TCAGCGTCAG
GGCTTTGACA TCATGATGAA GATGGCGCAG GGCACGCCGC AGCAAAAAGC GATGGCTCAG
GATGCGCTCA ACCGCTTCTG GTATCCGGCG CTGATGATGT TCGGCCCCTC GGACAAGGAC
TCGGTGCATT CCGCGCAGTC GATGGCGTGG AAAATCAAGA TGAACACCAA TGACGAGCTG
CGCCAGAAGT TCGTCGATCA GACCGTGCCA CAGGCGGAAT ACCTCGGCCT AACCGTGCCG
GACGAGAACC TCAAATGGAA CGAGGAAAAG GGCGGCTACG ACTTTTCCGA GCCCGACTGG
GAAGAGTTCT TTGAGGTCAT CAAAGGCAAC GGCCCCTGCA ACACCGACCG CCTGGCCGCG
CGCAACAAGG CCTGGGACGA CGGCAAATGG GTGCGCGAGG GCATGATGGC CCACGCCGAA
AAGAAACGCG CCCGCAAGAT GGCGGCGGAG TAA
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| Protein sequence | MYAQMVKSTG TGVKSTEEMS AEERAFQARI DAGEKIEPKD WMPEGYRKTL IRQIGQHAHS
EIVGQLPEGN WITRAPTLER KAILLAKVQD EAGHGLYLYC AAETLGVSRD EMTEMLLDGR
MKYSSIFNYP TLTWADMGAV GWLVDGAAIM NQVPLQRTSF GPYSRAMIRV CKEESFHQRQ
GFDIMMKMAQ GTPQQKAMAQ DALNRFWYPA LMMFGPSDKD SVHSAQSMAW KIKMNTNDEL
RQKFVDQTVP QAEYLGLTVP DENLKWNEEK GGYDFSEPDW EEFFEVIKGN GPCNTDRLAA
RNKAWDDGKW VREGMMAHAE KKRARKMAAE
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