| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3710 |
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| Symbol | |
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| ID | 4075679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 769037 |
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| End bp | 769717 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005230 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_611939 |
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| Protein GI | 99078681 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0845805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTTTG ATCGCTCCAT CAAGATCGCC CCTTCCATTC TTTCCGCGGA CTTCGCCAAC
TTTGGCCAGG AAATTCAGGC CATCGAAGCC CAGGGCGCGG ATTGGGTGCA TGTGGACGTG
ATGGATGGCC ACTTTGTGCC GAACCTCACC TTTGGCCCCG CAGCGGTCAA AGCCTTCCGC
CCGCACGTCA AAACCGTGAT GGACGTGCAT CTGATGATTG CGCCGGTCGA TCCCTATATC
GACGCTTACG CGGATGCGGG CGCCGATGTG CTGACCGCAC ATGTCGAAGC CGGGCCGCAT
ATCCACCGCA CGCTGCAAGC CATCCGCGCG GCGGGCATGA AGGCCGGTGT GGCGCTGAAT
CCCGGCACGC CGGCCGAGGC GGTGGCACAT CTCCTGGATT TGACCGATCT CATTTGCGTC
ATGACCGTGA ATCCGGGCTT TGGCGGCCAA AAGTTTATCG ACATGACTGC CAAGATCCGC
AGCCTCCGCG AGATGATCGG CGACCGCCCG GTGCACATCG AAATCGACGG TGGCGTTGAC
CCGACCACAG CGCCCCTTGT GGTCGAGGCC GGTGCTGACG TCCTGGTGGC AGGCTCTGCG
GTGTTCCGTG GCGGATCTGT CGAGGCCCCT GAGGTCTACG GCGAAAACAT CCGCAAGATC
CGCGCCGCTG CAAACGCCTG A
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| Protein sequence | MSFDRSIKIA PSILSADFAN FGQEIQAIEA QGADWVHVDV MDGHFVPNLT FGPAAVKAFR
PHVKTVMDVH LMIAPVDPYI DAYADAGADV LTAHVEAGPH IHRTLQAIRA AGMKAGVALN
PGTPAEAVAH LLDLTDLICV MTVNPGFGGQ KFIDMTAKIR SLREMIGDRP VHIEIDGGVD
PTTAPLVVEA GADVLVAGSA VFRGGSVEAP EVYGENIRKI RAAANA
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