| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3706 |
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| Symbol | |
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| ID | 4075675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 764648 |
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| End bp | 765967 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005226 |
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| Product | phosphonate ABC transporter permease |
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| Protein accession | YP_611935 |
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| Protein GI | 99078677 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.344193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC TCGACCTCAA CACCGCGCCG CTCAAAGGGC AGATGGACAA GCTGTTTTTC
AAGAAACGGC TGATGAACTT CGGCATTCCG GCCCTCATCC TCGCCTATCT CACCTATGTG
TTCTTTGCGT TTGACGTACC GGGCCTGTGG GAACGTGCCT CTATGGACAA TGCCCGCACG
CTGGTGTCCG ACACTTATAG CTACAAGACC CATGTGACTC GCGACAATCG CACGGGCGAT
GTGACCTACG CGGTTGAGGG GGAGCGCAAA GGCGAATACC CCGAAGGCAT GAGCCCCGAA
TGGGTCACGC CGGGGGCAAC CACGGTGATC GACCTCACAG GTGGCCATGT GGTGCGCTTT
GGCCCCGAGA CGATCGAATA TGATATTCCG GGCTATGGTC TCGTGACCGC CACGCCCTCG
CGCAGCCAAG GTGTACAGGC CGTCCTGCCC GAGGGTGAGG TGCCCGCGTG GATCAACCTC
TCGAAGAACC GTCTGGCGAT CACCACCGAT GCGGGGCGCC TGACCGTGAC CCGCAACCGC
GCCGAGGTTT TCCGCTATTT TTATGGCTGG GAGCTGTTCT TCTTCACGCT CGACAGCCCC
TATCACGGCA TGGGTCCGCT AGAGCTTGTG GGGCACGCAG TGTCTGGCGA GGCAGGCGCG
ATCTGGAACG ACTTCTGGAC CAACAAGATG TGGCGGCACA GCGATGTGGC CTGGGCCATC
GGTGAGACGA TCCTGATGGC CTTCCTCGGC ACCTTTGGTG CGGGTCTGGT GGCGCTGCCG
CTGGCCTTTC TGGGGACGCG GAATTTCATG CCCGTGCGGA TCATCCGCTT TGCCACCCGG
CGTGTCTTTG ACTTTGTGCG CGGTGTCGAC TCGCTCATCT GGACCGTTGT TCTGGCCCGT
GCCTTTGGTC CTGGTCCGCT CACCGGCGCG CTTGCGATCC TGATCACGGA CACCGGCACC
TTCGGCAAAA TCTTCTCCGA AGCCCTCGAA AACGTGGATG AAAAACAGAT CGAGGGCGTG
GCCTCCACCG GTGCAAAACC GGTCCAGCGC TACCGCTTTG GGGTGATCCC GCAGATTACG
CCGGTTCTGC TGTCGCAGCT TTTGTACTTC CTTGAATCAA ACACCCGCTC GGCCACCATT
ATCGGTGCCA TCACCGGCGG CGGGATCGGT CTCTTGCTCA CACAGGCGAT CATCACCCAA
AAGGACTGGG AAGAGGTCTC CTATTACATC GTTCTGATCA TCCTCATGGT GATGGTGATG
GATTGGTTCT CGGGCTGGCT GCGCAAGCGC CTGATCCGCG GCGATGAGGG TGGTCACTGA
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| Protein sequence | MTTLDLNTAP LKGQMDKLFF KKRLMNFGIP ALILAYLTYV FFAFDVPGLW ERASMDNART
LVSDTYSYKT HVTRDNRTGD VTYAVEGERK GEYPEGMSPE WVTPGATTVI DLTGGHVVRF
GPETIEYDIP GYGLVTATPS RSQGVQAVLP EGEVPAWINL SKNRLAITTD AGRLTVTRNR
AEVFRYFYGW ELFFFTLDSP YHGMGPLELV GHAVSGEAGA IWNDFWTNKM WRHSDVAWAI
GETILMAFLG TFGAGLVALP LAFLGTRNFM PVRIIRFATR RVFDFVRGVD SLIWTVVLAR
AFGPGPLTGA LAILITDTGT FGKIFSEALE NVDEKQIEGV ASTGAKPVQR YRFGVIPQIT
PVLLSQLLYF LESNTRSATI IGAITGGGIG LLLTQAIITQ KDWEEVSYYI VLIILMVMVM
DWFSGWLRKR LIRGDEGGH
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