| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3704 |
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| Symbol | |
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| ID | 4075673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 763112 |
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| End bp | 763834 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005224 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_611933 |
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| Protein GI | 99078675 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.317205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAG CCGCTTCCCG CACCCCGGTC TGGAAGTCGA TTGCAATCAC CTTGACCGAT
GACATCGCGC AAGGGCGCTA TGACCGCGGG GCGAAGCTGC CGGCAGAGGC GCAGCTCGCG
GAGCGCTTTG GCGTCAACCG TCACACGGTG CGGCGGGCGC TCGCGGATAT GTCGGAACAG
GGGCTGGTCC ACGCGCGGCG CGGCGCCGGG GTGTTTGTTG CCGCAAAACC CACCGATTAC
CCGGTTGGAA AACGCATCAG GTTTCACCAG AACATCCGGC GCGCAGGGCG CGTGCCTAGC
AAGAAAGTTC TGCGTCTCGA GACGCTTGCG GCCGACGCAA GGGAGGCCGA TGTGCTGGAG
CTGGAACCGG GCGACCCGGT GGTGGTTTAT GAAGGTCTGT CCTATGCGGA CGATCATCCG
GTTGCGCTGG CGCGGACGTT GTTTCCGGCA GACCGCCTGC CCGGCATCAT CGACGCGCTT
CAGTCACATG ACTCGATCAC GGCAGCGCTG AAGGCCTGCG GCGTAGAAGA TTATACCCGC
CGCGAAACCC GCATTACGGC AAAGCTTGCG ACCGCCACCC AGGCGCTACA TCTGCGCACG
TCTGAAGGCG CGCCGATCCT GCGCACCACC GGGATCTCGG ACGACCTCAA CGGTGTGCCG
ATCGAGTTCG GCCGCACATG GTTTGCAGGA GACCGGGTGA CGCTGACAGT TGGCGACGAC
TGA
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| Protein sequence | MTKAASRTPV WKSIAITLTD DIAQGRYDRG AKLPAEAQLA ERFGVNRHTV RRALADMSEQ
GLVHARRGAG VFVAAKPTDY PVGKRIRFHQ NIRRAGRVPS KKVLRLETLA ADAREADVLE
LEPGDPVVVY EGLSYADDHP VALARTLFPA DRLPGIIDAL QSHDSITAAL KACGVEDYTR
RETRITAKLA TATQALHLRT SEGAPILRTT GISDDLNGVP IEFGRTWFAG DRVTLTVGDD
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