| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3698 |
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| Symbol | |
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| ID | 4075667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 758313 |
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| End bp | 759017 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005218 |
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| Product | phosphonate C-P lyase system, PhnL |
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| Protein accession | YP_611927 |
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| Protein GI | 99078669 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.493547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CTCAAACTCC GATGATCGAC ATTCAAAATG TCTCCAAGAC TTTCACCCTG
CACAATCAGG GCAGCGCGCT TATTCCGGTG ATGGAGGGGG CAAACCTTTC CGTCAGCCCG
GGCGAGTGCG TTGGGCTGGT CGGGGCCTCC GGCGCCGGGA AATCGACCCT GATGCGGCTC
ATCTACGGCA ATTACCTTGC CGCCTCCGGC CATATCCTGA TCGGTGGGCT TGATGTCGCC
AATGCCGAGC CGCGCGAAAT TCTGGAACTG CGCCGCAAGA CACTTGGCTA CGTGAGCCAG
TTCCTGCGGG TGGTGCCTCG GGTTTCGACG CTTGATGTGG TCGCCGAGCC GCTCTTGTCG
GTGGGCACCC CGGTTGAAAA GGCGCGCGAC CGTGCGGCCT CGCTTCTGGC GCAGCTCAAC
ATCCCCGAAC GGCTCTGGAC CCTGAGCCCA ACGACATTTT CGGGCGGTGA ACAGCAGCGC
GTGAATATCG CCCGGGGCTT TGCCTATGAC TACCCGGCGA TGCTGCTGGA TGAGCCCACC
GCCAGCCTTG ATGCGCAAAA CCGCGCAACG GTTCTTGGCC TCATCGAGAG CGCCAAGGCG
CGGGGCGCAG CCATCATCGG CATCTTTCAC GACGAGGCCG CGCGCGAGCA GGTCTGCGAT
CGGTTTGTTG ATGTGTCGGC CTTTGCGCCA AAGGCTGCCG CATGA
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| Protein sequence | MTASQTPMID IQNVSKTFTL HNQGSALIPV MEGANLSVSP GECVGLVGAS GAGKSTLMRL
IYGNYLAASG HILIGGLDVA NAEPREILEL RRKTLGYVSQ FLRVVPRVST LDVVAEPLLS
VGTPVEKARD RAASLLAQLN IPERLWTLSP TTFSGGEQQR VNIARGFAYD YPAMLLDEPT
ASLDAQNRAT VLGLIESAKA RGAAIIGIFH DEAAREQVCD RFVDVSAFAP KAAA
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