| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3685 |
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| Symbol | |
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| ID | 4075654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 743586 |
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| End bp | 744743 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005205 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611914 |
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| Protein GI | 99078656 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.295297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA AACACCCCGA CGGCCGTTTT GTGGATGATG CGCCCTATGA CCCGCAGGCC
TCGATCCGCG AACTGGAGCG CAAGGATCTC GACGCGCCGA ACTGGGTGCT GATCTGGCGC
AAGTTCAAGA CCCACCGCCT GGGGTTGATC TCGGGCATAT TCCTGCTGTT TTGCTATGTG
ATGCTGCCGT TTGTAGGCTT CATCGCGCCC TATGGCCCCA ACGAGCGCAA CGCCGAGCAT
CTCTATTCGC CACCGCAGTC CGTGAACTTC TTTCACGAGG GCGAATTCCT GGGCCCGTTT
ATCTATCCGC TGACTTCAGA GGCCGATCTT GAGACATTTC AATGGGTGGT GAAGCCTGAT
TACGACAACC CGCAACAGAT CCGTTTCTTT TGCGAGGGGG CCGAATATCG ACTGGCGGGT
CTGATCCCTG CCAACACCCA TCTCTTTTGC GCGCCCGAAG GGGCGACATT GTTTCTCTGG
GGGTCAGATC GCCTGGGACG TGACATCTTC AGCCGCATTC TCTTTGGCGC GCAGCTCTCG
CTCACCGTGG GTCTGATCGG CATCACGGTA TCTTTTGTTC TCGGGATCTT TTTTGGCTCT
GTTGCGGGGT ATTTCGGCGG CAAGATCGAC TGGGTCATCA ACCGCGCCAT CGAAATCCTG
CGCAGCCTGC CCGAGCTGCC GCTCTGGCTG GCGCTTTCAG CAGCGGTCCC CTCCACATGG
TCGCCGGTGG CAGTGTTTTT CATCATTTCC ATCATCCTCG GCATCCTCGA CTGGCCGGGT
CTTGCGCGTT CCGTCAGGGC CAAGTTCCTG AGCCTGCGCG AAGAGGAATA CGTCCGCGCC
GCCGAAATGA TGGGCGCATC TTCAGGGCGC GTGATCAAGA AACACCTGCT GCCCAACTTC
ATGAGCCATC TTATCGCCTC GGCCACATTG TCGATCCCGG CAATGATCTT GGGAGAGACG
GCGCTCTCGT TCCTTGGGCT CGGTCTGCGC GCCCCGGCAG TGAGCTGGGG GGTGATGCTC
AATGACGCGC AGAACCTTGC CAATATCGAG ATCTACCCCT GGACCGCGAT CCCAATGCTG
CCGATCATCG TGGTCGTTCT GGCGTTCAAC TTTCTGGGCG ACGGTCTGCG CGATAGTCTG
GATCCCTATC AGCAATGA
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| Protein sequence | MSEKHPDGRF VDDAPYDPQA SIRELERKDL DAPNWVLIWR KFKTHRLGLI SGIFLLFCYV
MLPFVGFIAP YGPNERNAEH LYSPPQSVNF FHEGEFLGPF IYPLTSEADL ETFQWVVKPD
YDNPQQIRFF CEGAEYRLAG LIPANTHLFC APEGATLFLW GSDRLGRDIF SRILFGAQLS
LTVGLIGITV SFVLGIFFGS VAGYFGGKID WVINRAIEIL RSLPELPLWL ALSAAVPSTW
SPVAVFFIIS IILGILDWPG LARSVRAKFL SLREEEYVRA AEMMGASSGR VIKKHLLPNF
MSHLIASATL SIPAMILGET ALSFLGLGLR APAVSWGVML NDAQNLANIE IYPWTAIPML
PIIVVVLAFN FLGDGLRDSL DPYQQ
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