| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3675 |
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| Symbol | |
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| ID | 4075644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 728286 |
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| End bp | 729134 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005195 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_611904 |
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| Protein GI | 99078646 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.841584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT TTCGCTACCG CACGCCAGAG GGCGTACGTC CGGGCCTGAT CGACGCGCAG
GGCGTGGCGC GGGACCTGTC GGGGCATGTT GCGGATGTGA CATCCGAGAC ACTGGGCGCC
TCTGTGCTGG AGACGCTTCA GTCGGTAGAT CAGAGCGCGT TGCCAGAGCT GACAGGCCCG
ATTGATTACG CTCCCTGCGT CGGTGCGATC GGCAAATTCC TCTGCATCGG ACTCAACTAT
TCCGATCATG CTGAAGAGGT CGGCGCGACA CCACCCGAGC ACCCCATTCT TTTCATGAAA
GCAAATTCAG CGATTGTCGG GGCCAATGAC GACGTGCGCC TCCCCCGAGG TTCCAAGGCC
TCAGACTGGG AAGTCGAGTT GGGTGTGGTG ATCGGCAAGG CGGCAAAATA TGTCTCGGTC
GAAGAGGCGC TCGATCATGT TGCGGGGTAT TGCATCGTCA ATGATGTCTC CGAGCGGGAC
TATCAGCTGC ACCTGACCGG CCAGTGGACC AAGGGCAAGA GCTGCGACAC CTTTGGCCCG
ATTGGCCCAT GGCTCGTTAC CGCAGACGAG GTAAGCGACC CGCAGGATCT GGCGCTGTCA
TGTGATGTGA ACGGCACCCG CATGCAGACC GGCAACACCA ACAAGATGAT CTTTTCTGTT
GCTGAGGTGA TTAGTCATCT GAGCCAACTG ATGACCCTGC ACCCTGGAGA CATCATTGCA
ACCGGCACGC CGCCCGGCGT TGGCATGGGG CAGAAACCCG AGCCCGTATA CCTGAAGGAT
GGCGATGTAA TGGAGCTTGA AATTCAAGGA CTTGGAAAGC AACGTCAGGT CGTACGCGCT
GACGACTAA
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| Protein sequence | MKLFRYRTPE GVRPGLIDAQ GVARDLSGHV ADVTSETLGA SVLETLQSVD QSALPELTGP
IDYAPCVGAI GKFLCIGLNY SDHAEEVGAT PPEHPILFMK ANSAIVGAND DVRLPRGSKA
SDWEVELGVV IGKAAKYVSV EEALDHVAGY CIVNDVSERD YQLHLTGQWT KGKSCDTFGP
IGPWLVTADE VSDPQDLALS CDVNGTRMQT GNTNKMIFSV AEVISHLSQL MTLHPGDIIA
TGTPPGVGMG QKPEPVYLKD GDVMELEIQG LGKQRQVVRA DD
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