| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3672 |
|---|
| Symbol | |
|---|
| ID | 4075641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 725233 |
|---|
| End bp | 726333 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638005192 |
|---|
| Product | zinc-binding alcohol dehydrogenase |
|---|
| Protein accession | YP_611901 |
|---|
| Protein GI | 99078643 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.618419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAA TCAAGGCCGC CGTGTGCCAT AGCTTTGGAA GCGCGCTCGA AATCGAAGAC
GTGGTGCTTG CGTCGCCCGG GCCGGGCGAG GTTGAAGTCA CGCTGGATGC GGTCGCTATC
TGTCACAGCG ATATCTCCTT TGCCGAAGGC GCATGGGGCG GGCCGCTGCC GGCGGTCTAC
GGACATGAGG CGGCTGGTCG TGTCTCGGCG CTGGGGCGTG ATGTCGATGG TTTCAACATC
GGCGATGATG TGCTGGTGAC CCTCATCCGC GCCTGCCGCC ACTGTTCCGC GTGCACATCA
GGACAGCCAG TCTACTGCGC GACACCCTAT GACGGGTTGC AAGGCCCGCT CAGCACCCCA
TCCGGCGCGC CACTCTATCA GGCGATGGCC TGTGGCGCTT TCGCCGAAAA AGTGGTGGTC
TCTGGCAGCC AGATTGTGGC CATTCCGGCT GATATGCCCA AAGACGTTGC CGCACTTGTC
TCGTGCGGGG TCATCACGGG CGTCGGCGGT GCCGTACACT CTGCGAAGTT GCGGGCAGGC
GAAGATGTGG TTGTCATTGG CGCGGGCGGT GTCGGTCTCA ACGCGATCCA GGGCGCTCGC
ATCGCCGGTG CGCGCCGCAT CGTTGCCGTC GATCTGAGCG CTGAAAAGCT CGATGTAGCG
CGCGACTTTG GCGCGACGGA CACGGTGCTG GCCTCCGATC TCAAACCGTG GCGCGCCGCT
ATCGACGCCC TTGGCGGCAA GGGCGCAGAG GTGGTGCTGA TCACTGTGGG TGCGATCCCC
GCTTATGCCC AGGCTCCGCG CTATCTGGCG CCGGGCGGGC GCGCGGTGAT GATCGGTATG
CCGCATTCCG GTGATACTGC GCCCTACGAG CCTGTGGTCA TGGCCGCTTT GGGGCAAGGT
CTGCAAGGCT CAAAGATGGG CGATGTCGTG CTTCAACGTG ATGTGCCATG GATCATCGAC
CTCTACCAGC AAGGTCGTCT GAAACTCGAC GAGCTGATCT CTGGTCGCTG GTCCTTGCTT
CAAATCAATG AGGCGATTGC AGATACCAAG ACTGGGTCTG CACGTCGCAA TGTTATCCTC
TTTGATCACG ATCACCCCTG A
|
|---|
| Protein sequence | MQTIKAAVCH SFGSALEIED VVLASPGPGE VEVTLDAVAI CHSDISFAEG AWGGPLPAVY
GHEAAGRVSA LGRDVDGFNI GDDVLVTLIR ACRHCSACTS GQPVYCATPY DGLQGPLSTP
SGAPLYQAMA CGAFAEKVVV SGSQIVAIPA DMPKDVAALV SCGVITGVGG AVHSAKLRAG
EDVVVIGAGG VGLNAIQGAR IAGARRIVAV DLSAEKLDVA RDFGATDTVL ASDLKPWRAA
IDALGGKGAE VVLITVGAIP AYAQAPRYLA PGGRAVMIGM PHSGDTAPYE PVVMAALGQG
LQGSKMGDVV LQRDVPWIID LYQQGRLKLD ELISGRWSLL QINEAIADTK TGSARRNVIL
FDHDHP
|
|---|
| |