| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3671 |
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| Symbol | |
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| ID | 4075640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 724386 |
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| End bp | 725099 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005191 |
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| Product | helix-turn-helix, type 11 |
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| Protein accession | YP_611900 |
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| Protein GI | 99078642 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.255542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC GCGCCCGCCA AGATGCCATT GTCCGCACTC TGCGTCGTCG CGGGTCCACC
ACTCTTGCGG CGTTGGGGGA AGAGGTTGAT GCCTCGCGCA GCACGGTCTT GCGCGACCTC
TCGGCGCTGC GCGATGCGGG ATATGTCATC CATGCCGAAC AGGGGCGCGG CGGTGGCGTG
TCCCTTGATC CGAGCTCGGT TCAGACCACA GCCAGACTGT CAGTTGCAGA GGTGTTTGCG
CTCATCATGG GTGTTGCCTC CATGCGGGCT GCAGGTGTGA TCCCATTCTC GAGCCTCGCG
GACAGCGGCG TGGCGAAGAT CGAAAAAGCG CTGCCGCCCG ACAAGCTGCG GGAATTGCGC
CGAATGCTCG ACCGGCTCTA TGTCGGCCCG CTCGCCTCAC AAGTGGATAT TTCTGACCTG
AAGGAGATGG TGCCCGAGTT GCTGCCAGCC TTTGAAGCCG CCTTTCTTGG CCAGAGACGG
CTGCGATTTC AGTACTGCGA CGCCAAGGGC GCGTGGACGT CACGAGAGAT CGAACCTCAG
GCGATGCTGG TCCTGCCGCC TCTGTGGTAT CTGGTTGCCT GGGATCCAAG CCGAAATGAC
TTTCGCCATT TTCGCGCCGA CAGGATCAGC GCACCCGAAG TGATCGAGAC GACGCGATTT
CGACCCCGGA ACGTCACGTT TGCCGCCGGT GTCCGCCCGA TCCGCTATGC TTGA
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| Protein sequence | MKQRARQDAI VRTLRRRGST TLAALGEEVD ASRSTVLRDL SALRDAGYVI HAEQGRGGGV
SLDPSSVQTT ARLSVAEVFA LIMGVASMRA AGVIPFSSLA DSGVAKIEKA LPPDKLRELR
RMLDRLYVGP LASQVDISDL KEMVPELLPA FEAAFLGQRR LRFQYCDAKG AWTSREIEPQ
AMLVLPPLWY LVAWDPSRND FRHFRADRIS APEVIETTRF RPRNVTFAAG VRPIRYA
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