| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3669 |
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| Symbol | |
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| ID | 4075638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 721903 |
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| End bp | 723342 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005189 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_611898 |
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| Protein GI | 99078640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.731231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGAT CCCTGTCCCT TCGCCTGCGC ATCTTCCTGT TCTTCTGCCT CCTGGCTGTG
GGAGCAATCG CGCTGGCTGC GGTGGCGTTG GGTTTTGTCT GGACCCGCTC TGATTCAGAG
TGGACGGCTT CAGAACTCAC CACGGTGATC CTGTTGTTCG GGTTTTTGAA TACAGGTCTG
GTGCTGGGGA TCTGGCTGCT GTTTGACGAA AACGTCGCGC GCCCGATCGA GGGGCTTTCG
ACCAGTCTGC GCCTGCGTGC CCACTCCGGA ATTGAGGACA GCATCAAAGC ACAGGCAGCG
CAATACCTCG GCGATCTGGC CCCGGCGGCA CGCGCGCTGT CGGATGCGCT TGCGGCTTCT
GGAGATCAGC CACCAGAACA GACCCAGCGC CTGCTTCAGG AACGGGAGCG GCTGACTGCG
TTGCTCAGCG AAATTCCCAT TGCGACGATC CTTGTAAACG CAGCAGGTGA GATTGCACTC
TATGACGCGC AGGCCGGGGC CATCCTCTCC CGCATCGCCG CACCGCGCCT TGGGGCGCCA
CTCTCGAACT ATTTCGATCT GACGCCCGCA ATCGGCGCCT GTGCCCGAGC AGACCGGCGC
CTCGTAGCGG GGCATGTGAC CGTCCCAGAC TGCAATCATG CCGAAACGTT CAATCTGCAG
ATAAAATCGC TCGGTGCGGA GGGCGATGTG ATCTTCCTTG AAGCCGATAC GCGGGCGGAG
CGCGACACGC TGTCCCCTCC TTTGGTCTTT GATTTTGACC TTCTGGATCA GAAACTTGAG
GGGACGATAA CGGCCAGACG CCTCTCGGAG CTGAACTTCG TGGTCTTTGA CACCGAGACG
ACCGGGTTGT CGGTTACCAA GGATGCCATC GTGGAACTCG CCGCTGCCCG TGTGCTGAAC
GGGCGCATCC TCGACGGCGA GGTCTTTGAA ACCTATGTCG ATCCAGGCCG ACCGATCCCC
GCAGCGTCCA CCAAGATACA TGGCGTACGC GATGCGGATG TGGCGCAGTC ACCCCGGATC
GAAGCGGTGA TCCCGGCGTT TCATGACTTT GCACAGAGCG CCGTTCTGGT TGCCCATAAC
GCCCCCTTTG ACATCGGGCT ATTGCGTCAA CAAGAGGTTC AGACCGGGTG CAGTTGGGAC
CATCCGGTTG TCGATACAGT GCTGTTGTCG GCCTTAGTGT TTGGGATTTC AGCGGATCAT
TCGCTGGATG CTTTGTGCAG CCGTCTTTCG ATCGAAATCC CCGCCCGGCA CCGCCATACG
GCCAAGGGAG ATGCGCGCGC TACGGCAGAA GCGCTCATAC GCCTTCTGCC GCTCTTGCAG
GGCAAGGGGA TCGAGACCTT TGGTCAACTC CTAAAGGAAA CCTCCAAATT TGGCCGACTG
CTGCGGGACA TCAACTCTGA CCACGTCCGA AACGCGCCCG AGATGAGCGA CAGCCCCTAG
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| Protein sequence | MLRSLSLRLR IFLFFCLLAV GAIALAAVAL GFVWTRSDSE WTASELTTVI LLFGFLNTGL
VLGIWLLFDE NVARPIEGLS TSLRLRAHSG IEDSIKAQAA QYLGDLAPAA RALSDALAAS
GDQPPEQTQR LLQERERLTA LLSEIPIATI LVNAAGEIAL YDAQAGAILS RIAAPRLGAP
LSNYFDLTPA IGACARADRR LVAGHVTVPD CNHAETFNLQ IKSLGAEGDV IFLEADTRAE
RDTLSPPLVF DFDLLDQKLE GTITARRLSE LNFVVFDTET TGLSVTKDAI VELAAARVLN
GRILDGEVFE TYVDPGRPIP AASTKIHGVR DADVAQSPRI EAVIPAFHDF AQSAVLVAHN
APFDIGLLRQ QEVQTGCSWD HPVVDTVLLS ALVFGISADH SLDALCSRLS IEIPARHRHT
AKGDARATAE ALIRLLPLLQ GKGIETFGQL LKETSKFGRL LRDINSDHVR NAPEMSDSP
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