Gene TM1040_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3668 
Symbol 
ID4075637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp721382 
End bp721900 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID638005188 
Producthypothetical protein 
Protein accessionYP_611897 
Protein GI99078639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.341575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTAG AATTGATCGC AACCATCGTC GCGGGCATTG CCTGTGCTGG CCTCGTGATG 
CTTCTGAACA TCTTGACGGG ACGCCGCCTG CCCAAGTGGA TGATGCCTGT GGCAGCGGGG
CTTGGTATGA TCGGCATGAC GATTTCCAAC GAATATACCT GGTATGCGCG CACCACCGAG
AGCCTGCCCA AAGGGCTTGA AGTCGCGATG ACCGTTGAAG AACAGGGCTG GCTGCGCCCC
TGGACGCAGA TCTGGCCCTA CACGAAACGT TTTGTTGCAG TGGATGTGGC GACCGCGCGC
ACGCATCAGG ATCTGCCGGA TCAAAAGCTG CTGGATCTCT ATTTCTTTGG GCGCTGGTCG
CCGGTCAATC AGGCACCGAT GCTCTTTGAC TGCGCCGAGG CCCGCTCTGC TCTCTTGATT
GATGGCGCCG AGTTCGGCGC CGATGGGACG GTTGCAGATG CCGATTGGCG AGCCATGCCC
AAAGATGATC CAATCCTGGC CAAAGTCTGC ACCGCATAG
 
Protein sequence
MFVELIATIV AGIACAGLVM LLNILTGRRL PKWMMPVAAG LGMIGMTISN EYTWYARTTE 
SLPKGLEVAM TVEEQGWLRP WTQIWPYTKR FVAVDVATAR THQDLPDQKL LDLYFFGRWS
PVNQAPMLFD CAEARSALLI DGAEFGADGT VADADWRAMP KDDPILAKVC TA