Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3668 |
Symbol | |
ID | 4075637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 721382 |
End bp | 721900 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005188 |
Product | hypothetical protein |
Protein accession | YP_611897 |
Protein GI | 99078639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.341575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGTAG AATTGATCGC AACCATCGTC GCGGGCATTG CCTGTGCTGG CCTCGTGATG CTTCTGAACA TCTTGACGGG ACGCCGCCTG CCCAAGTGGA TGATGCCTGT GGCAGCGGGG CTTGGTATGA TCGGCATGAC GATTTCCAAC GAATATACCT GGTATGCGCG CACCACCGAG AGCCTGCCCA AAGGGCTTGA AGTCGCGATG ACCGTTGAAG AACAGGGCTG GCTGCGCCCC TGGACGCAGA TCTGGCCCTA CACGAAACGT TTTGTTGCAG TGGATGTGGC GACCGCGCGC ACGCATCAGG ATCTGCCGGA TCAAAAGCTG CTGGATCTCT ATTTCTTTGG GCGCTGGTCG CCGGTCAATC AGGCACCGAT GCTCTTTGAC TGCGCCGAGG CCCGCTCTGC TCTCTTGATT GATGGCGCCG AGTTCGGCGC CGATGGGACG GTTGCAGATG CCGATTGGCG AGCCATGCCC AAAGATGATC CAATCCTGGC CAAAGTCTGC ACCGCATAG
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Protein sequence | MFVELIATIV AGIACAGLVM LLNILTGRRL PKWMMPVAAG LGMIGMTISN EYTWYARTTE SLPKGLEVAM TVEEQGWLRP WTQIWPYTKR FVAVDVATAR THQDLPDQKL LDLYFFGRWS PVNQAPMLFD CAEARSALLI DGAEFGADGT VADADWRAMP KDDPILAKVC TA
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