| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3667 |
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| Symbol | |
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| ID | 4075636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 719557 |
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| End bp | 721377 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005187 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_611896 |
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| Protein GI | 99078638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.773951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAC CGGCCGCCCT CACCCAGTTT CTCGCATCCG TGCACCCCTA CGACAGCCTG
CCCGATCCGG TGCTGGCGCA TGTGGCGCAG CAATGTGCGT TACACAATGT AGCTGTGGAT
GAGCGGCTCT TCTCTCTCGG CGATACGGTG TCTTCTCTTT ATATTATCGT CTCGGGCGAG
ATCGAGATCA CCGACGAAGC CGGGGTGCAA CTGTCGATCC TTGGCTCACG CAATTCCTTT
GGCGAACGCG CGCTCCTGCG CGGAGAGCGT GCAAGCCGCA GCGCGAGGGC GACCTCTGCG
AGCGAGGTGA TCGCCCTCCC CGCCGAGGTG TTTCACCAGC TTATCGACCA GCATGAATCG
GTCGCGCGCT TCTTCGACCG CCGCCGACCA CCTCCGCGCA CGGGCAACAG CCTTGCCAGT
CTCACGGTGG AGCAGTTGAT GACGCGCGCG CCTGTCACCT GTACGCCTGA GACGCCCATT
CGCGACGCTG CCGCGCTGAT GCACCGCCAT CACATCTCCT CGATCTGTAT CTGTGATCCG
GATGGGTTCC ACGGGATCGT GACCCTGCGC GATCTGAACA GCAAAGTGAT CGTGGGTGGC
ATAGATCCGC TCGAGCCGAT CTCCGGGATC ATGACGGAGG ATGTGCTGAC GTTGGCGCCA
CAGGCGTTGG TCACGGATGT CCTGCATCTG ATGGTGGAGC GTAACATCCA CCATGTTCCG
ATTGTGAACG AGAGAGGCCT GTTGGGCATC GTCACGCAAA CCGATCTCAC TCGAGCGCAG
GCGCTCTCTT CCGCCGATCT GGTCGGCCGT ATTGCGCGGG CCGAGGACGC CTCCGAGATG
GCGCGGGCCA CGGCGCAGAT CCCGCAACTC CTGGTGCAGC TCGTTGAAGC GGGCAATCGG
CATGAGGTGA TCACGCGTCT GATCACCGAC ATTGCTGACA TCGCTACTCG ACGGCTCCTC
TCTCTGGCAG AAGCACAGCT TGGTCCGCCG CCCGTACCTT ATCTTTGGCT CGCGTGTGGC
TCGCAGGGAC GTCAGGAACA GACCGGGGTT TCCGATCAGG ACAATTGCCT GATCCTGTCT
GATGACTTGA CTGATGCGCA AATGCCCTAC TTTGCGAAGC TGGCCCGATT TGTCAGTGAT
GGGCTTGATC GCTGTGGCTA TTTCTACTGT CCGGGCGACA TGATGGCGAC CAACCCACGC
TGGTGTCAGC CCTTGCGAGT CTGGCGCGGG TATTTCCAGA CTTGGATCGC CAAACCCGAT
CCCGAAGCGC AGATGCTTGC CTCGGTCATG TTCGACCTGC GCCCGATCGG CGGGGACAAG
AGCCTCTTTG ATCACCTTCA GAGCGACACG CTTGAGGCTG CCGCAAAGAA TTCGATCTTT
ACCGCGCATA TGATCTCCAA TTCGCTCAAG CATCAGCCGC CTCTCGGCCT GTTGCGCGGA
TTGGCAACCA TCCGCTCTGG CGATCACCGG GATGAGCTTG ATCTGAAACA CAACGGCGTC
GTGCCGGTGG TGGATCTGGG CCGGATATAT ACGCTGCAGG GGCGGCTGCG GCCGGTGAAC
ACCCGCGCGC GGCTTGAAGC GGCCCTTGCT GCGGGGCTTC TGTCTGCGTC CGGGGGGGCC
GATCTCTTGG ATGCCTATGA TCTCATTGCA TCCATGCGGC TTGAATTGCA GACCAAACAG
ATCAAAGCGG GCCAGGCTGC GGGCAACTAT CTCAACCCAT CTTCGCTGTC GGATTTTGAA
CGCAGCCATT TGCGCAATGC CTTTGTGGTC GTGAAGACCA TGCAATCTGC CGTTGGCTCG
GGCACAGGAA CCTTAGGATG A
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| Protein sequence | MPLPAALTQF LASVHPYDSL PDPVLAHVAQ QCALHNVAVD ERLFSLGDTV SSLYIIVSGE
IEITDEAGVQ LSILGSRNSF GERALLRGER ASRSARATSA SEVIALPAEV FHQLIDQHES
VARFFDRRRP PPRTGNSLAS LTVEQLMTRA PVTCTPETPI RDAAALMHRH HISSICICDP
DGFHGIVTLR DLNSKVIVGG IDPLEPISGI MTEDVLTLAP QALVTDVLHL MVERNIHHVP
IVNERGLLGI VTQTDLTRAQ ALSSADLVGR IARAEDASEM ARATAQIPQL LVQLVEAGNR
HEVITRLITD IADIATRRLL SLAEAQLGPP PVPYLWLACG SQGRQEQTGV SDQDNCLILS
DDLTDAQMPY FAKLARFVSD GLDRCGYFYC PGDMMATNPR WCQPLRVWRG YFQTWIAKPD
PEAQMLASVM FDLRPIGGDK SLFDHLQSDT LEAAAKNSIF TAHMISNSLK HQPPLGLLRG
LATIRSGDHR DELDLKHNGV VPVVDLGRIY TLQGRLRPVN TRARLEAALA AGLLSASGGA
DLLDAYDLIA SMRLELQTKQ IKAGQAAGNY LNPSSLSDFE RSHLRNAFVV VKTMQSAVGS
GTGTLG
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