| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3656 |
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| Symbol | |
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| ID | 4075625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 710173 |
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| End bp | 710850 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005176 |
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| Product | TenA family transcription regulator |
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| Protein accession | YP_611885 |
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| Protein GI | 99078627 |
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| COG category | [K] Transcription |
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| COG ID | [COG0819] Putative transcription activator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.754332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CCTATGGCAA GGCTTTCTCC TTGATGCGCG CAGAGGCAGA ACCGGCGTGG
CGGGCGTATA CTCACCATGC CTTTGTCGAG GGGCTCAAAG CCGGAACCCT GCCGCGAGAG
GCGTTTCTGC ATTATTTGCA GCAGGACTAT GTGTTCTTGA TCCACTTTTC ACGCGCTTGG
GCGCTTGCGG TCGTCAAATC TGAAACCCAC AGCGAGATGC TGGCGGCCGT TGGCACAGTG
AATGCGTTGG TCGCTGAGGA GATGCAGCTC CATATCGGCA TATGCGAGGC TTCAGGTATT
TCGCAGGAAG CGCTGTTCGC CACTCGCGAG CGGGCCGAGA ACCTCGCCTA CACGCGCTTT
GTGCTGGAGG CGGGATACAG TGGGGATCTG CTCGATCTGC TTGCGGCGTT GGCGCCTTGC
GTGATGGGTT ATGGCGAGAT CGGAAAGCGT CTGACCGCCG AGGCGACCTC GACGCTCTAC
GGGGACTGGA TCGACACCTA TGGCGGTGAC GACTATCAGG CCGCCTGCAA AGCGGTCGGA
ACTTTGCTTG ACGACGCACT CGAGCGCCGG TTGGGTGCAG AGTTCACCTC GTCGCCGAGA
TGGTCCCGCC TGTGTCAGAC GTTCCACACT GCAACAGAGC TTGAAGTCGG CTTCTGGCAA
ATGGGACTCA CGCCATGA
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| Protein sequence | MSEPYGKAFS LMRAEAEPAW RAYTHHAFVE GLKAGTLPRE AFLHYLQQDY VFLIHFSRAW
ALAVVKSETH SEMLAAVGTV NALVAEEMQL HIGICEASGI SQEALFATRE RAENLAYTRF
VLEAGYSGDL LDLLAALAPC VMGYGEIGKR LTAEATSTLY GDWIDTYGGD DYQAACKAVG
TLLDDALERR LGAEFTSSPR WSRLCQTFHT ATELEVGFWQ MGLTP
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