Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3646 |
Symbol | |
ID | 4075074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 701537 |
End bp | 701965 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005166 |
Product | protein of unknown function DUF395, YeeE/YedE |
Protein accession | YP_611875 |
Protein GI | 99078617 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.415893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTTA TCTATACTGT TCTGACCGGC CTTGTCTTTG GCGTCGGGAT CGCGCTCTCT GGGATGATGA ATCCCGCCAA AGTTCTGAAT TTCTTTGATA TTGCAGGGGG GTGGGATCCA AGTCTTGCCT TTGTGATGGG CGGCGCGCTC ACCATCACAT TTATCGGCTA CCGGTTGGTC TGGCGCCGGC AGGCACCGCT TTTTGAGGGG CGCTTTCAGA TCCCTTCTTC GACCTTGATC GACTCAAAAC TGGTGGGGGG TGCGGCGCTC TTTGGGGTTG GCTGGGGCAT CGCCGGCTTT TGTCCTGGTG CGGCGATCCC GGCCCTGGGC ACCGGCCGCT GGGAGGTCGC GCTGTTCCTC CTCGCAGTCA TTGGCGGTTT TTTTCTGCGC CGTCTTCTTT CAAACTTGCC CAGTAACGTC ACCTCTTAA
|
Protein sequence | MRFIYTVLTG LVFGVGIALS GMMNPAKVLN FFDIAGGWDP SLAFVMGGAL TITFIGYRLV WRRQAPLFEG RFQIPSSTLI DSKLVGGAAL FGVGWGIAGF CPGAAIPALG TGRWEVALFL LAVIGGFFLR RLLSNLPSNV TS
|
| |