Gene TM1040_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3646 
Symbol 
ID4075074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp701537 
End bp701965 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content58% 
IMG OID638005166 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_611875 
Protein GI99078617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.415893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTA TCTATACTGT TCTGACCGGC CTTGTCTTTG GCGTCGGGAT CGCGCTCTCT 
GGGATGATGA ATCCCGCCAA AGTTCTGAAT TTCTTTGATA TTGCAGGGGG GTGGGATCCA
AGTCTTGCCT TTGTGATGGG CGGCGCGCTC ACCATCACAT TTATCGGCTA CCGGTTGGTC
TGGCGCCGGC AGGCACCGCT TTTTGAGGGG CGCTTTCAGA TCCCTTCTTC GACCTTGATC
GACTCAAAAC TGGTGGGGGG TGCGGCGCTC TTTGGGGTTG GCTGGGGCAT CGCCGGCTTT
TGTCCTGGTG CGGCGATCCC GGCCCTGGGC ACCGGCCGCT GGGAGGTCGC GCTGTTCCTC
CTCGCAGTCA TTGGCGGTTT TTTTCTGCGC CGTCTTCTTT CAAACTTGCC CAGTAACGTC
ACCTCTTAA
 
Protein sequence
MRFIYTVLTG LVFGVGIALS GMMNPAKVLN FFDIAGGWDP SLAFVMGGAL TITFIGYRLV 
WRRQAPLFEG RFQIPSSTLI DSKLVGGAAL FGVGWGIAGF CPGAAIPALG TGRWEVALFL
LAVIGGFFLR RLLSNLPSNV TS