Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3645 |
Symbol | |
ID | 4075073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 701101 |
End bp | 701532 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005165 |
Product | protein of unknown function DUF395, YeeE/YedE |
Protein accession | YP_611874 |
Protein GI | 99078616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.301745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACTG ACTTTACGCC TGTGTTGTCA TTTGGGGGCG GGACCTTGAT TGGCTTGGCT GCCGTTCTGC TGATGCTCGG ACTGGGCCGC ATCTTGGGGG CAACAGGAAT TCTGTCGGGC ACAGTCTTTG TGACCTCGCG AGAAGAACTG TCTTGGCGCG TCGCGCTCAT ACTCGGCATG CTGCTCGCGC CCGGAGCGAT TTATTTCGCC ACCGGCGTGA TGCCTGCCAT TTCGGTTCCC TCAAGTCCCG CCATGATCGT CATTGGCGGC GTGATTGTTG GCTTCGGCGC AAGCCTTGGC TCTGGCTGTA CATCCGGGCA TGGCGTTTGC GGCCTCTCGC GGCTTTCGCT GCGCTCTATC GTAGCGGTCC CCACCTTCAT GGCAACCGCG GCCATAACCG TATTCCTGAT CCGTCACGTT TTTGGAGGCT AA
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Protein sequence | MQTDFTPVLS FGGGTLIGLA AVLLMLGLGR ILGATGILSG TVFVTSREEL SWRVALILGM LLAPGAIYFA TGVMPAISVP SSPAMIVIGG VIVGFGASLG SGCTSGHGVC GLSRLSLRSI VAVPTFMATA AITVFLIRHV FGG
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