Gene TM1040_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3645 
Symbol 
ID4075073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp701101 
End bp701532 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content59% 
IMG OID638005165 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_611874 
Protein GI99078616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.301745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTG ACTTTACGCC TGTGTTGTCA TTTGGGGGCG GGACCTTGAT TGGCTTGGCT 
GCCGTTCTGC TGATGCTCGG ACTGGGCCGC ATCTTGGGGG CAACAGGAAT TCTGTCGGGC
ACAGTCTTTG TGACCTCGCG AGAAGAACTG TCTTGGCGCG TCGCGCTCAT ACTCGGCATG
CTGCTCGCGC CCGGAGCGAT TTATTTCGCC ACCGGCGTGA TGCCTGCCAT TTCGGTTCCC
TCAAGTCCCG CCATGATCGT CATTGGCGGC GTGATTGTTG GCTTCGGCGC AAGCCTTGGC
TCTGGCTGTA CATCCGGGCA TGGCGTTTGC GGCCTCTCGC GGCTTTCGCT GCGCTCTATC
GTAGCGGTCC CCACCTTCAT GGCAACCGCG GCCATAACCG TATTCCTGAT CCGTCACGTT
TTTGGAGGCT AA
 
Protein sequence
MQTDFTPVLS FGGGTLIGLA AVLLMLGLGR ILGATGILSG TVFVTSREEL SWRVALILGM 
LLAPGAIYFA TGVMPAISVP SSPAMIVIGG VIVGFGASLG SGCTSGHGVC GLSRLSLRSI
VAVPTFMATA AITVFLIRHV FGG