| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3613 |
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| Symbol | |
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| ID | 4075040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 668225 |
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| End bp | 669037 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005132 |
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| Product | hypothetical protein |
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| Protein accession | YP_611842 |
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| Protein GI | 99078584 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00635836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCTTTC TGGACGACTT CATAATTCGC GCAGCGCTTG CCGGGATTGG AGTGGCCTTT
GCCGCCGCCC CTCTTGGCTG TTTTGTCGTG TGGCGCCGGA TGGCCTACTT TGGCGACGCC
ACCGCACATG CATCGATCCT CGGCGTTGCG CTGGCGCTGA CATTCGATGT GTCGATTTTC
AGTGGCGTGC TTGTAACAGC GCTGCTGATG GCCAGCACCA TTTCAACGCT AAGTGGGCGT
GGATATGCAA TGGATACGCT CCTGGGAGTG ATGGCCCACA GCGCTCTGGC ACTGGGGTTG
GTTGCTGTGT CCTTCTTGCA AGGAGTGCGC GTCGACCTCA TGGCCTATCT TTTTGGCGAT
ATTCTGGCCG TATCCCGCGG GGACCTCGCG GTGATCTGGT CGGGTGCCGC CATGGTGCTC
GGGCTCATGT GGTGGCGCTG GTCCTCGCTG TTGATCGCGA CCCTGAACCC CGAACTTGCG
CAGGCCTCTG GCGTCAACCC GAGGCGCGAG CAACTTGTGC TCACGCTTGC GCTTGCCCTT
GTCGTGGCCG TCGCGATCAA GGTGGTCGGT GTCTTGTTGA TTGCGGCGAT GTTGCTGATA
CCAGCCGCAA CAGCCCGGGC CTTTTCCTCC ACGCCGGAGC GGATGGCGGT TTTGGCGATC
TGCATCGGCT GCGCCTCTGT CGTGGGAGGC ATCTACGTTT CTTTTGGCGC GGACACACCT
ACAGGCCCCA CCATCGTCAG CACCGGAACC GCGCTCTTTG CTGCCGCCAG CATTGTGGCC
CTGATCGGAA GAAGCTTGCG CCGCCAAGGA TGA
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| Protein sequence | MIFLDDFIIR AALAGIGVAF AAAPLGCFVV WRRMAYFGDA TAHASILGVA LALTFDVSIF
SGVLVTALLM ASTISTLSGR GYAMDTLLGV MAHSALALGL VAVSFLQGVR VDLMAYLFGD
ILAVSRGDLA VIWSGAAMVL GLMWWRWSSL LIATLNPELA QASGVNPRRE QLVLTLALAL
VVAVAIKVVG VLLIAAMLLI PAATARAFSS TPERMAVLAI CIGCASVVGG IYVSFGADTP
TGPTIVSTGT ALFAAASIVA LIGRSLRRQG
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