| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3611 |
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| Symbol | |
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| ID | 4075038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 664980 |
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| End bp | 665789 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638005130 |
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| Product | phosphonate-binding periplasmic protein |
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| Protein accession | YP_611840 |
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| Protein GI | 99078582 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0876291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGG CATACGCGTC TGTTAGAAGC ACAGCGGCTC ATTCGCCTTC TGGGTGTGGC
GCTGTGAAAC GACTCGCCAC CGCGCTGGTT GCATGCGTGC TACTGCTCGT TGCAGCGCAT
CCCGCTCGTG CAGAGATTGA GTTGGTTTTT GGCACTTATG CTGCAGACAA GCCGTCTGCG
ACGGTGCGCA AATATCGTCC GTTTTTGACT TTCCTTGAAA ACCAGATGGA AATTCTTCTC
GAAGAAGATG TCACGATCGG TTTGAAAATT TCAAAAGACT ACGAGACCAG CATCGACGAT
CTGGCGATCG GGCGAGTCGA CTTTGCACGG TTTGGACCAG CCTCCTATGT GCATGCAACG
GATCGCAACC CGGGCATATC GATCATTGCC ATGGAGTCCA AGAAAGGCAG CAAGCGCTTT
AGAGGGGTGA TCGCCGTTCA CAAGGACAGC GGCATCGAAC GTGTCGAAGA TCTGGCCGGG
CTGTCGTTTG CCTTTGGTGA TGAGTTGTCG ACGATCGGAC GGTATCTCTC GCAGTCGTAT
CTGTTGGATG CGGGGATCAC GGCTGATCAG CTGCATGGCT ATGAATATTT GGGGCGCCAC
GATCTTGTGG GTGAGGCGGT TGGAGCCGGA AAATTCAGTG CGGGTGCCTT GAAAGAGAGC
ACCTTTAAAG AACTCGTTGC CAAAGGTGTG CCCATCCGCG CTCTGGCGTC TTTTGACAAC
GTCACAAAGC CCTGGCTTGC ACGCGCGGGG CTCGACGAAC GGGTACTGGA GGCGATGAAG
TCTGTGATGT TGTCTTCGCA GAATGAATAG
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| Protein sequence | MPKAYASVRS TAAHSPSGCG AVKRLATALV ACVLLLVAAH PARAEIELVF GTYAADKPSA
TVRKYRPFLT FLENQMEILL EEDVTIGLKI SKDYETSIDD LAIGRVDFAR FGPASYVHAT
DRNPGISIIA MESKKGSKRF RGVIAVHKDS GIERVEDLAG LSFAFGDELS TIGRYLSQSY
LLDAGITADQ LHGYEYLGRH DLVGEAVGAG KFSAGALKES TFKELVAKGV PIRALASFDN
VTKPWLARAG LDERVLEAMK SVMLSSQNE
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