| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3609 |
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| Symbol | |
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| ID | 4075036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 659788 |
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| End bp | 660702 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005128 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_611838 |
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| Protein GI | 99078580 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.252965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0456005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC CGATTGACCC ACAGCAAGCC AACCGACTGC TCAGTACCAT CAAGTCCCGC
ATCGAGACTT TGCCACCCAA GCTGAAGACC GCGGCGAAAT ATGTGATCGA TTCCCCCGGG
GACTTTGGGC TCGACCCAAT TCGCGTGAGC GCAGACAAGG CGGGAGTCAG CCCAAATACG
CTCACTCGGC TGGCAGAGGT GTTCGACTAC GAAGGCTTTG AGGATTTTCG TGCGCCGTTT
CGTGCCGCAT TGGTCACGGA TCGGGAGGCA GACCTTGGCT CAGAGTGGCT CGACCAGCTG
GCTGCGGGTG ATCAGACATC GGCTCTTCAG GCGCGCGCGG CACGTAATGC GCTCAATATC
ACCGCCCGTT CCTTGCGGTT GATGACCCCA GAGCGAACGA CAGCGATCGT CGACGCGATG
ACTTCTGCGC GGCACTGTTT TGTCACCGCA AGCCGGTCGA CACATGCCTT GGCTTATTAC
TTTCACTATG TTGGACGCAT GGCCCTGCCG ACGCTCGAGC TAGTGCCTCG CCACATGGGC
GATGCCGCAG ACGATCTTCT CGATATTGGG CCGCAGGACT GCCTCTTTGC GATGACGTTT
GCGCCGTATT CCACAAGCAC GATCCGCGCG ATCCGCATGG CACGGGAAGC CGGAGCAACC
GTGATCCTGC TCTCGGATAG TGACACCATT GCACCGGGGG TGCGGGCGGA CCATCAGCTC
ACCTTCTCGG CGCAATCTCC ACATCATTTT GGCTGCCTGT CGGGGGCGAT GGTCCTTCTT
GAGAGCCTGC TATCGCACCT GATCCATGCC GGCGGCGCAG ATGCACAGGC CCGAATTTCG
CGGTATGAGA CCCTACGCCA GGACAGCGGC GTCTATTGGA GCGCAAAGCG CCTGCCGCGT
ACGCCCTCAC GATAA
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| Protein sequence | MTKPIDPQQA NRLLSTIKSR IETLPPKLKT AAKYVIDSPG DFGLDPIRVS ADKAGVSPNT
LTRLAEVFDY EGFEDFRAPF RAALVTDREA DLGSEWLDQL AAGDQTSALQ ARAARNALNI
TARSLRLMTP ERTTAIVDAM TSARHCFVTA SRSTHALAYY FHYVGRMALP TLELVPRHMG
DAADDLLDIG PQDCLFAMTF APYSTSTIRA IRMAREAGAT VILLSDSDTI APGVRADHQL
TFSAQSPHHF GCLSGAMVLL ESLLSHLIHA GGADAQARIS RYETLRQDSG VYWSAKRLPR
TPSR
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