| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3607 |
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| Symbol | |
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| ID | 4075034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 657267 |
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| End bp | 658217 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005126 |
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| Product | asparaginase |
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| Protein accession | YP_611836 |
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| Protein GI | 99078578 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.143302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTT GCGTAATCCA CACCGGCGGC ACCATTGGCA TGGCCCCCTC GCCAGAGGGG
TTTGCCCCCA AAACAGGAAT CGTGGAGGCG GAGCTGGACC GTTTGCAGCG CATCGGCGCA
ATAGAGGCTG ATTTCAGGGT TGTGACGGCA TCCCCTTTGA TCGACAGCGC CAACGCTACC
TCGGCGGATT GGAACTGGAT CATGGCGCAG ATCGCAGCGC ATGATGATGA TTGCGCGGGG
TTTGTGGTGA CACATGGCAC CGACACACTC GCCTTTACAG CCGCTGCTTT GTCCTTTGGT
CTCAAAGGGT TGCGCAAGCC GGTTGTGATC ACCGGAGCGA TGCTGCCACT TTCCGAGGAG
GGCAGCGACG GCAGCGACAA CCTCCGAGAC GCGTTTCGCG CGGTCGAACA GGCTGCGCCC
GGCGTCTGGG TCCAATTTGC AGGGAAGTTG CTGCATGGCG CGCGGGTGCG AAAATCGCAT
TCGGTGGCCT TTGACGCATT CAACGCATCA CCAACGGATG CCGCCCCCCT CCGGGCGGCC
GAAACTCTCG GCATTTTTGA ATACGGCGAT GCCACCGCGC TGATTGCGGC GGTGGCTCCG
GGAATGAATG CCTCCTTGAT TTCTTATGCG GTAGAACAGG CCGCGGGGAT TGTACTGCGC
TGTTACGGCT CTGGCACCGT GCCCGAGGGC CTGGGGCTGC GCAAAGCCAT GTTGCAAGCA
CGAGACACCG GCGTTCCGGT CCTCGCCGTG AGCCAATGTG CCGAGGGCGG CATTTCCCTT
GGTACTTATG CGGCGGGTGC AATGCTTGCG CAGACCGGAG CTATCGACGG GCGCGACATG
ACCGTCGAGG CGGCCTATGC CAAGCTGCTG CATGCGCTGT CGCAAAGCGC AGATCTGGCG
ACTCGGCGCG AGATCCTTGA AACCCGCCTA TGTGGAGAAT GGGCCTTGTA G
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| Protein sequence | MTICVIHTGG TIGMAPSPEG FAPKTGIVEA ELDRLQRIGA IEADFRVVTA SPLIDSANAT
SADWNWIMAQ IAAHDDDCAG FVVTHGTDTL AFTAAALSFG LKGLRKPVVI TGAMLPLSEE
GSDGSDNLRD AFRAVEQAAP GVWVQFAGKL LHGARVRKSH SVAFDAFNAS PTDAAPLRAA
ETLGIFEYGD ATALIAAVAP GMNASLISYA VEQAAGIVLR CYGSGTVPEG LGLRKAMLQA
RDTGVPVLAV SQCAEGGISL GTYAAGAMLA QTGAIDGRDM TVEAAYAKLL HALSQSADLA
TRREILETRL CGEWAL
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