| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3600 |
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| Symbol | |
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| ID | 4075027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 649135 |
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| End bp | 650130 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005119 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_611829 |
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| Protein GI | 99078571 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA CGCTTCTTTC CGTAAAGAAC CTGACCCTCG ACATTCCCAC CGGCAGCGGC
ACGCTGCACG CCGTGCGCGG CATCGATTTT GACCTAATGC GCGGCGAGAC CCTCTCTATC
GTGGGCGAAA GCGGCTCCGG AAAGTCACTG ACCTCGCTGG CTGTCATGGG GCTGTTGGGC
AAGTCAATCA AACGCCGCGC CGATGAGATG CGGTTTGAAA ACATCGACCT TCTGACGGCG
AACCGCCGGG TGATGCGCGA TCTGCGCGGC AACCGCATGG CGATGATCTT CCAAGAGCCG
ATGACATCGC TCAACCCAGC CTACACCATC GGCGATCAGT TGACCGAAAC GCTGCTGCTG
CATCGCAAGG TCAGCAAGTC TGCCGCTCGC GCGCGGGCCA TTGAGCTGCT TGAAAAGGTC
GGCATCACCG CAGCCGAGAG CCGCCTGTCG CAATATCCGC ACCAGTTGTC CGGTGGTTTG
CGTCAGCGGG TGATGATTGC CTTGGCCCTG ATGTGCGAGC CGGACCTGCT GATCGCGGAT
GAGCCGACGA CCGCGCTGGA TGTGACCATT CAGGCGCAGA TCCTACGTCT CTTGGTCGAC
CTCACGCGGG AAATGAACAT GGCCATGATC TTGATCACCC ATGATCTCGG CGTGGTGGCG
CGCGTCGCCG ACAAAGTGGC CGTGATGTAT GCGGGAGAGC TTGTGGAGAC CGGCCCTGCA
GCGGACGTGT TTGCGACTCC AAGCCATCCC TACACACGCG GACTTTTGCG CTGCATCCCG
CAACCCGGCA AGACCGAGCG CGGGGCCGCT CTGGGGACCA TTCCGGGCAT CGTGCCGTCC
CTCATTGGCG AGGTGAGCGG CTGCGCCTTC CGCACCCGCT GCCTGCATGC GCGTCCAGAG
TGCCGCGCCG ACATTCCCCT TCGAGGCGAA GCAAGCCATG AGTTCAAATG CATTCACCCA
GACGGGGCTC TATCCCATGA AGGAGAGGCG GTATGA
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| Protein sequence | MSDTLLSVKN LTLDIPTGSG TLHAVRGIDF DLMRGETLSI VGESGSGKSL TSLAVMGLLG
KSIKRRADEM RFENIDLLTA NRRVMRDLRG NRMAMIFQEP MTSLNPAYTI GDQLTETLLL
HRKVSKSAAR ARAIELLEKV GITAAESRLS QYPHQLSGGL RQRVMIALAL MCEPDLLIAD
EPTTALDVTI QAQILRLLVD LTREMNMAMI LITHDLGVVA RVADKVAVMY AGELVETGPA
ADVFATPSHP YTRGLLRCIP QPGKTERGAA LGTIPGIVPS LIGEVSGCAF RTRCLHARPE
CRADIPLRGE ASHEFKCIHP DGALSHEGEA V
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