| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3599 |
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| Symbol | |
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| ID | 4075026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 648155 |
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| End bp | 649138 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005118 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_611828 |
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| Protein GI | 99078570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG TTCTGACCCT GAATGGGGTG ACTAAAACCT ACAGCGTCAA ACAGGGTCTG
TTCGGCGCAC GAAAGCCGCT CACAGCGGTG AATAACGTCT CACTCTCACT GGGCAAGGGA
GAGGTCCTGG GCCTCGTGGG AGAGTCGGGG TGCGGCAAAT CCACCCTCGC CAAGCTTTTG
CTTGGACTGG AAAAACCCAC CTCGGGTCAG GTACTTGTGG ACGGCGCGCC AATGGACGCG
CTGGATCGTC GCGCCCTCGC GGGTCGGCTT CAGCCCATAT TTCAGGACCC CTACTCCTCA
CTCAATCCGC GCAAATCCAT CTATGATCTG ATCTCTTTGC CCCTGCGCGT ACACAAGATT
GGCGACAGCA CCAGCCAGCG CAAGGCTGTG AAAGAGATGC TGGATGTGGT CGGCCTGCCG
CAACGGGTCA TGAACACATA CCCAAGCCAA ATGTCTGGTG GCCAGCGTCA GCGCGTTGCC
ATTGCCCGTG CCTTGGTGAT GAAGCCGGAA ATCGTCATCT GCGATGAACC CACCTCCGCG
CTGGATGTTT CCGTGCAAAG CCAGATCCTG AACCTGCTCG GCGACCTCAG GCGCGAGTTT
GGCCTCACCT ATCTGTTCAT CAGCCACGAT CTCGCGGTTG TTGAACACCT GGCGACGCGG
GTGGCGGTGA TGTATCTCGG GCGTATTGTC GAAGAAGCCC CGGTGGCCGA ACTATTCGAG
ACGCCCAAAC ACCCCTATAC CCGCGCGCTC CTGAGCTCGG TCCTCACCCC AGAGCCGGGA
CTGGGTGTGC CGGAAACAGC GCTTGGCACC GCCTATCCAA ACCCGATCGC CCCTCCTTCG
GGGTGCGCCT TTCATCCACG GTGTCCGTTG GCAACGGCGC ATTGCAAAAC GCAGGCTCCC
CGCACAATCG CGACTGCGCA AGGGCGTGTG GAATGCCACT ATGAAGATCC CGACAGCCCG
ATGCCGCGAA AGGATGCAGC ATGA
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| Protein sequence | MSDVLTLNGV TKTYSVKQGL FGARKPLTAV NNVSLSLGKG EVLGLVGESG CGKSTLAKLL
LGLEKPTSGQ VLVDGAPMDA LDRRALAGRL QPIFQDPYSS LNPRKSIYDL ISLPLRVHKI
GDSTSQRKAV KEMLDVVGLP QRVMNTYPSQ MSGGQRQRVA IARALVMKPE IVICDEPTSA
LDVSVQSQIL NLLGDLRREF GLTYLFISHD LAVVEHLATR VAVMYLGRIV EEAPVAELFE
TPKHPYTRAL LSSVLTPEPG LGVPETALGT AYPNPIAPPS GCAFHPRCPL ATAHCKTQAP
RTIATAQGRV ECHYEDPDSP MPRKDAA
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