| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3595 |
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| Symbol | |
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| ID | 4075522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 643537 |
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| End bp | 644469 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005114 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_611824 |
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| Protein GI | 99078566 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.802749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTCA ATCTTATCAA TGTCGTCCTG CCTGTCTTTG TGGTCGTCGG CATCGGGTAT
GGGCTCACTC TTCGCGGGGT GTTTCAGCAG GTCCAGATCG ACGGTTTAAT GAAATTCGCC
CAAGGGGTCG CGATCCCCTT TCTGCTATTT CGCGCCATGG CGGGGATCGA CCTCCAATCC
GGCTTTGATC CGCGCTTGCT GATCAGTTTT TACACTGGCG CGGCGATTTG TTTCTTCGCC
GGGTTTATGG GTGCGCGTGT GTTTTTCAAG CGCGATTGGG AAGACTGCGT CGCCATTGGC
TTTTGTTGCC TGTTTTCAAA CTCTGTTCTT TTGGGGCTGC CGATCACAGA ACGCGCCTTC
GGTCCCGATG CTCTGGTAGG GAATTACGCG ATTATCGCGT TTCACTCGCC GTTCTGCTAT
GCGCTTGGCA TCACCGCGAT GGAGATTATC CGCAATCGCG GGCAAGGGGG ACTGCGTACG
GCCACATCCG TGTTCCGGTC AATTTTCAAG AACAACCTGA TCCTCGCCAT ACTGGCGGGG
TTTGCGGTAA ATCTCTCGGG ATTGAGCGTG CCCGAACCCG TCGATGATGC GCTGGCACTG
GTGGCCAAGG CGGGTCTGCC CACGGCGCTT TTTGCGCTTG GTGGGATCAT GGTGCAGTAC
CGACCCGAAG GGGATCTGCG CACCATTGCG ATGGTCTGCT GTATTGCGTT GCTTTTGCAT
CCGGCCATCG TCTACGCGCT CGGATCTGCA TTGGATGTGC GCCAGGATCT CTTCCGCTCG
GGCGTCCTGA ATGCGGCCAT GGCGCCGGGC GTCAATGGCT ATATCTTTGC CAATATGTAC
GGGCGGGCCA AACGTGTTGC GGCGTCTTCG GTCTTGATTG CGACCGCCTC AAGCGTTGTG
ACCGTGCTCC TTTGGCTGAC GTTGCTCAGC TGA
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| Protein sequence | MIFNLINVVL PVFVVVGIGY GLTLRGVFQQ VQIDGLMKFA QGVAIPFLLF RAMAGIDLQS
GFDPRLLISF YTGAAICFFA GFMGARVFFK RDWEDCVAIG FCCLFSNSVL LGLPITERAF
GPDALVGNYA IIAFHSPFCY ALGITAMEII RNRGQGGLRT ATSVFRSIFK NNLILAILAG
FAVNLSGLSV PEPVDDALAL VAKAGLPTAL FALGGIMVQY RPEGDLRTIA MVCCIALLLH
PAIVYALGSA LDVRQDLFRS GVLNAAMAPG VNGYIFANMY GRAKRVAASS VLIATASSVV
TVLLWLTLLS
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