| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3585 |
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| Symbol | |
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| ID | 4075513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 634104 |
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| End bp | 635339 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005105 |
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| Product | phage integrase |
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| Protein accession | YP_611816 |
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| Protein GI | 99078558 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.597607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAT TTGCTTCCAC AGTGCTTCCA CGGAAGCGCA GCAGAGAGGA GACCAAATTG
CCAAAACTGA CGAAACGAAC CGTCGAAGCC CTCATGCCAG AGGCCAAAGA TTACTTCCTC
TGGGACAGCC AAATCGCGGG TTTCGGCGTC CGGGTCATGC CCTCTGGTGC GAAGACCTAT
CAGGCGCAGT ATCGCAAGGG GGGCAGAACC CGGCGCGTAT CCGTTGGGCG GCATGGCAAA
ATCACAGTTG ATGAAGCTCG TAAGCTGGCC AAGGAGATCA TGGGGCAGGT CGCCAAGGGC
GAGAACCCCG CCGAAGAGAT CTCGCAGCAC CGCAAAGCCC CCACCGTGGC TGCGCTCTGT
GAGCGCTTCT TTGAGGCCCA CGCTAAAGAA CGCTGCAAGC CTTCCACCCA AAAGGAATAT
CGACGCGCCA TCGATCTGTT TATCGTACCC GCACTGGGGA GCTTTAAGGT CGTAGACGTC
GAGCGCCGGG ACATTGCCGA GTTACACCAC AAATTCCGCG ACAAGCCGCA TCAGGCCAAT
CGGACGCTGG GCGTTCTGTC GAAGATGTTC AATCTAGCCG AGATCTGGGG CCTGCGCCCG
GATGGCTCTA ATCCCTGCCG CCATGTCCCG AAGTACCGCG AAGTGAAGCG GGAACGCTTC
TTGAGCCAAT CGGAGCTGCA ACGGTTGGGG CAGGTTCTGA CCGAAGTGGA GCGCGAAGGC
AGCGAAACGC CGCATATGGT CGCGGCATTC CGGCTGCTGA TCCTGACCGG CTGTCGGTTG
GGTGAAATCC AAACTTTGAA ATGGGGCTAC ATCACCGCAA ACGGAATGGA GCTACCGGAC
AGCAAGACCG GGGCGCGGCG CATCCCCCTG CCCCAACCGG CGCGGGACGT ACTGGCGCGC
CTGCCGCGCA CCCCCGGCCA TCCTTACGTG ATCGAAGGGA AACTCCCCGG CCAATATGCC
ACTGACCTGC AACACCCATG GCGGCGCATC CGAGACCGGG CGGGCCTCTG TGGCGTACGC
ATTCATGACC TGCGCCATAC CTATGCATCG AATGCGGTCT CTGCTGGAAT GCCGATCCAG
ATGGTCGGGC GCTTGCTGGG CCATACCCAG ATCCAAACCA CAATGCGGTA TGCGCATCTG
GCAGATGATC CAGTCCGACA AGCCGCAGAA GAAAACGCCG CGCGTTTGGG GTCTATGGTC
GGTGATATCG GGCGTCCGAG GTTGCGGGCC GTGTAA
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| Protein sequence | MRSFASTVLP RKRSREETKL PKLTKRTVEA LMPEAKDYFL WDSQIAGFGV RVMPSGAKTY
QAQYRKGGRT RRVSVGRHGK ITVDEARKLA KEIMGQVAKG ENPAEEISQH RKAPTVAALC
ERFFEAHAKE RCKPSTQKEY RRAIDLFIVP ALGSFKVVDV ERRDIAELHH KFRDKPHQAN
RTLGVLSKMF NLAEIWGLRP DGSNPCRHVP KYREVKRERF LSQSELQRLG QVLTEVEREG
SETPHMVAAF RLLILTGCRL GEIQTLKWGY ITANGMELPD SKTGARRIPL PQPARDVLAR
LPRTPGHPYV IEGKLPGQYA TDLQHPWRRI RDRAGLCGVR IHDLRHTYAS NAVSAGMPIQ
MVGRLLGHTQ IQTTMRYAHL ADDPVRQAAE ENAARLGSMV GDIGRPRLRA V
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