Gene TM1040_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3576 
Symbol 
ID4075498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp616098 
End bp616508 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID638005090 
Producthypothetical protein 
Protein accessionYP_611807 
Protein GI99078549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.278774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0687844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGC TTCAAAAACT CTCAGTTGGA TATTTTGTGG CGCTGATGAT CGCCGCATCA 
TTGAACTATA TCCCCGGCCT GACCGACGAA GCCGGGCTCG CCTTTGGGAT TTTTGCACTC
GATCTTTATG ATGACGCGCT GCATGTGGCC TCAGCTCTCT GGGCTTTGAT TGCTGGTCTG
ATGTCTCACC GAGCGGCGCG CAGCTTTCTG ATCCTGTTCG GCCTTGCCTA TCTTGGCGAT
GGGATCTTTG GCTTCTTTAC CGGATATGGC TACCTGGACC TTGGGATCTT TACCAACGAG
GCCCTCGGGA TGGAGATTTC TCTACGCCGC GTGCTTGCAA ACCTCCCCCA TCTCGCGCTT
GGGGGCGTGG CGGTCTGGGC GGGCCTGCGC AATCTGGGCC AGCGACAATG A
 
Protein sequence
MTLLQKLSVG YFVALMIAAS LNYIPGLTDE AGLAFGIFAL DLYDDALHVA SALWALIAGL 
MSHRAARSFL ILFGLAYLGD GIFGFFTGYG YLDLGIFTNE ALGMEISLRR VLANLPHLAL
GGVAVWAGLR NLGQRQ