Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3576 |
Symbol | |
ID | 4075498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 616098 |
End bp | 616508 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638005090 |
Product | hypothetical protein |
Protein accession | YP_611807 |
Protein GI | 99078549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.278774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0687844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGC TTCAAAAACT CTCAGTTGGA TATTTTGTGG CGCTGATGAT CGCCGCATCA TTGAACTATA TCCCCGGCCT GACCGACGAA GCCGGGCTCG CCTTTGGGAT TTTTGCACTC GATCTTTATG ATGACGCGCT GCATGTGGCC TCAGCTCTCT GGGCTTTGAT TGCTGGTCTG ATGTCTCACC GAGCGGCGCG CAGCTTTCTG ATCCTGTTCG GCCTTGCCTA TCTTGGCGAT GGGATCTTTG GCTTCTTTAC CGGATATGGC TACCTGGACC TTGGGATCTT TACCAACGAG GCCCTCGGGA TGGAGATTTC TCTACGCCGC GTGCTTGCAA ACCTCCCCCA TCTCGCGCTT GGGGGCGTGG CGGTCTGGGC GGGCCTGCGC AATCTGGGCC AGCGACAATG A
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Protein sequence | MTLLQKLSVG YFVALMIAAS LNYIPGLTDE AGLAFGIFAL DLYDDALHVA SALWALIAGL MSHRAARSFL ILFGLAYLGD GIFGFFTGYG YLDLGIFTNE ALGMEISLRR VLANLPHLAL GGVAVWAGLR NLGQRQ
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