| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3563 |
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| Symbol | hisD |
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| ID | 4075484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 604396 |
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| End bp | 605700 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005076 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_611794 |
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| Protein GI | 99078536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0867737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTAT TTCTGACTTC TGCTGAGGCA GACTTCGAAC AATCCTTCAC CACCCTCTTG
AACGCAAAAC GAGAGGACAG CCCAGATGTG GACGCCGTCG TCGCGGACAT TATTGCGGAT
GTGCGGGGAC GCGGAGATGC GGCTCTGCTG GAGCTGACGC AGAAATTTGA CCGCCTAGAC
CTGCCCGATT CGGCAGCGCT GAGAATCACT GCAGAGGAAG TCGACGACGC CATCAAATCC
GTGTCAGAGG CCGAGCGCGC AGCACTTGAA CTCGCAGCGG ACCGTATTCG TGCCTATCAC
GCTGAACAAA TGCCAGAAAA CAAGAGCTGG ACGGATGCCG GCGGCGCAAC CCTCGGGTGG
CGCTGGTCGG CTGTTTCCGC GGCAGGACTC TATGTGCCCG GCGGGCTTGC CAGCTATCCG
TCCTCTGTGC TGATGAATGC CATTCCCGCC AAGGTTGCAG GAGTCGAACG TCTTGCGGTG
ACGGTTCCGA CGCCGGACGG GCAGATCAAC CCTCTGGTGC TCCTGGCGTG TCGGGTTTCT
GGCGTCGACG AAATTTACCG CGTTGGCGGC GCGCAAGCGA TCGCCGCGCT TGCGTATGGG
ACCGAAACCA TCGCCCCTGT GGATAAGATC ACAGGCCCCG GCAACGCCTT TGTGGCAGCC
GCCAAGCGGC GCGTATTTGG TAAAGTCGGC ATCGACATGA TCGCTGGGCC CTCCGAGATC
CTTGTGATCG CGGACAAGGA CAACAACCCA GATTGGATCG CATTGGACCT GCTCAGTCAG
GCGGAGCATG ACGAAAGCGC GCAATCCATC CTGATCACCG ACGATGCGGA ATTCGGATCT
GCGGTGGCGG TGGCGGTCGA TAAACGACTG GAAACGCTGG AACGCCGCGC CATCGCCGGC
GCCAGCTGGC GTGATTTCGG CGCTGTAATC GTAGTGCGTG ACATGGACGA GGCGGCGGCG
CTTTCCAACC GGATTGCACC CGAGCACCTT GAACTCTGTG TCGCCGATCC CGAAGCGCTG
AGCAAGAAAA CGATCCACGC GGGCGCAATT TTCATGGGCC AATATACGCC TGAGGCCATT
GGAGACTACA TCGGCGGGCC AAATCACGTC CTGCCCACGG CGAGGTCTGC GCGCTTCTCC
TCCGGTCTGT CGGTGATGGA TTTCATCAAG CGCACAACTC TGAGTCAGAT GACCCCCGAC
GCCTTGCGCA GCATTGGACC AGCGGCGGCG ACGCTGGCCG AGAGCGAGAG CCTCGAAGCG
CACGGGCTGT CCGTTCTCGC TCGCCTTGAG GCACTCAACC GCTGA
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| Protein sequence | MPVFLTSAEA DFEQSFTTLL NAKREDSPDV DAVVADIIAD VRGRGDAALL ELTQKFDRLD
LPDSAALRIT AEEVDDAIKS VSEAERAALE LAADRIRAYH AEQMPENKSW TDAGGATLGW
RWSAVSAAGL YVPGGLASYP SSVLMNAIPA KVAGVERLAV TVPTPDGQIN PLVLLACRVS
GVDEIYRVGG AQAIAALAYG TETIAPVDKI TGPGNAFVAA AKRRVFGKVG IDMIAGPSEI
LVIADKDNNP DWIALDLLSQ AEHDESAQSI LITDDAEFGS AVAVAVDKRL ETLERRAIAG
ASWRDFGAVI VVRDMDEAAA LSNRIAPEHL ELCVADPEAL SKKTIHAGAI FMGQYTPEAI
GDYIGGPNHV LPTARSARFS SGLSVMDFIK RTTLSQMTPD ALRSIGPAAA TLAESESLEA
HGLSVLARLE ALNR
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