Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3558 |
Symbol | |
ID | 4075479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 601223 |
End bp | 602101 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005071 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_611789 |
Protein GI | 99078531 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.200517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CAACAGCCGC CTACCCGCTC GACTGGCTCG ACAGCTGGAC CCATTATGAG GACAAACTGT CCAAATGGGT CTCGGAGGCT GCTGATGGCG GCGCGGAACT GCTGGTCTTT CCCGAATATG GTGCGATGGA GCTTGCCACT TTGGATGGAG CCGACATCGC AGGCAATCTC GAAGCCTCGA TCCAGGCGGT GTCGGACAAA ATGGAAGACG CTGCGCAACT GCATCTCAAG CTCGCGGCAG AGCACAACGT GCATATTCTC GGCGCATCTG CGCCCGTTCA TGCTGGCTTC ACGCGCCCGG TAAATCGGGC GGAGTTCTAC TCCCCCCAAG GCAAACGCGC GCATCAGGAC AAACAGATCA TGACCATGTT TGAGCGCGAT CCCTGGGATA TTGCGCCCGG CGGCCCGCTC AAGATCTTTG AGACCGCGCT TGGCAAGATT GCAGTCCTCA TCTGCTATGA CAGCGAATAC CCGCTTTTGG CGCGGGCCCT CTCGGAGGCG GATATGATTC TTGTGCCCTC TTGCACGGAG GCCCTTGCGG GATACTGGCG CGTGCGCATT GGGGCGATGT CTCGCGCGCT CGAACAGCAA TGCGTCACGG TGATGTCATC TGTGGTTGGC TCTGCTGCAT GGTCAGAAGC CGTGGACGAA GGCTGTGGGA TGGGCGGTGT CTTTGGACCA CCAGATACCG GCTTTCCCAG CACAGGCGTG ATCGCAGAAG GCACCCTCAA CCAGCCCGGT TGGACCTTTG CAGAGGTGGA TCTGCAGGCT GTCCAAAATG TGCGCAGCGC CGGCGTTGTG CGCAACAAGA CTCACTGGGG TGAGCAGGAC TCGCGCCTGC AAAATCTTGT TAACCATAAC TTGCTATAA
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Protein sequence | MKIATAAYPL DWLDSWTHYE DKLSKWVSEA ADGGAELLVF PEYGAMELAT LDGADIAGNL EASIQAVSDK MEDAAQLHLK LAAEHNVHIL GASAPVHAGF TRPVNRAEFY SPQGKRAHQD KQIMTMFERD PWDIAPGGPL KIFETALGKI AVLICYDSEY PLLARALSEA DMILVPSCTE ALAGYWRVRI GAMSRALEQQ CVTVMSSVVG SAAWSEAVDE GCGMGGVFGP PDTGFPSTGV IAEGTLNQPG WTFAEVDLQA VQNVRSAGVV RNKTHWGEQD SRLQNLVNHN LL
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