| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3551 |
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| Symbol | |
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| ID | 4075227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 594681 |
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| End bp | 596180 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005063 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_611782 |
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| Protein GI | 99078524 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.795147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA TCACCCAATC CGAGATCAAC AAGGCCGCCT GGGGCGCATG TGACACCTTC
CGGGGCGTGG TCGATCCGTC CATCTACAAG GACTACGTGC TGACCATGCT GTTCCTGAAG
TACGTCAGCG ACGTCTGGAA GGACCACAAA GCCAGCTATG CGGCGCATTA TCCTGACAGC
CCGGAACTCG TCGCGGCCAT GATGGAGCGG GAAACCTTCA AACTGCCTGA GACCGCCAGC
TTCGACGCTC TGCATGGACG TCGCCACGAA CCCGGCAACG GAGAACGTAT CGACAAGGCC
CTCCACGCCA TCGAAGAGGC CAACGGCTCC AAGCTGCGCG ACGTCTTCCA GGACATCAGC
TTCAACTCCA ACAAGCTGGG TGATGAGGAG CAGAAGAACG ACATCCTGCG CCACCTGCTG
GAGGACTTCG CCAAGACCGC GCTCGACCTG CGCCCATCGA GAGTGGGTAA CCTCGACATC
ATTGGCGGGG CCTACGAATA CCTGATCTCG CGCTTTGCGG CCACAGCGGG CAAGAAGGCG
GGCGAGTTCT ACACCCCGGC GGAGGTCTCG GAGCTGATGG CGCGGCTGGT CGATCCACAG
CCTGGTGACG ATATCTGCGA CCCCACTTGT GGCTCCGCCT CGCTGTTGAT GAAATGCGGG
CGGCTGATCC GCGAGGGCGG TAGCAAAGCC TATGCGCTGT TCGGGCAAGA GGCCATCGGG
TCCACCTGGG CGCTGGCCAA GATGAACCTC TTCCTGCATG GCGAGGAGAA CCACCAAATC
GAATGGGGCG ACACCATCCG CAACCCCAAG CTGCGGACGT CGGATGACAT GCTGCGCCAT
TTTGACGTGG TCGTCGCCAA TCCGCCTTTC AGCCTGGACA AGTGGGGGGT CGAGAGCGCA
GAAGCCGACA AGTTTGCCCG CTTCCGCCGT GGCATCCCGC CCAAGACCAA GGGCGATTAT
GCCTTCATCT TGCACATGAT CGAGACGCTG AAGCCCAAGA CCGGGCGCAT GGCCGTGGTT
GTGCCACATG GGGTGCTGTT CCGCGGATCG AGCGAGGGAA AGATCCGCCA CAAGCTGATT
GAGGACAACC TGCTGGACGC CGTCATCGGC CTGCCGGAAA AGCTGTTCTT CGGTACCGGC
ATTCCATCGG CGATTTTGGT CTTCCGCAAG GACAAGGCTG ACGACAGCGT GTTGTTCGTC
GATGCCAGCC GGGAGTTTGT GGCAGGCACC AACCAGAACG CGCTGGATAT GACACTGATC
GAGAAGATCG TGGCCACACA TCAGACGCGG CAGACGGTGG AGAAGTACGC ATACCGTGCC
ACACTGGCTG AGATCATCGA GAACGATTTC AACCTCAACA TCCCCCGCTA CGTGGACACA
TTCGAGGAAG AGGAAGAAAT CGACCTGATG GCCGTGCGGG CTGAACGGAT GAAGTTGAAG
GGCGAAATGG CCGAGCTGGA AGACCGGATG GAAGGCTATC TGCAGGAGCT GGGTTACTGA
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| Protein sequence | MTPITQSEIN KAAWGACDTF RGVVDPSIYK DYVLTMLFLK YVSDVWKDHK ASYAAHYPDS
PELVAAMMER ETFKLPETAS FDALHGRRHE PGNGERIDKA LHAIEEANGS KLRDVFQDIS
FNSNKLGDEE QKNDILRHLL EDFAKTALDL RPSRVGNLDI IGGAYEYLIS RFAATAGKKA
GEFYTPAEVS ELMARLVDPQ PGDDICDPTC GSASLLMKCG RLIREGGSKA YALFGQEAIG
STWALAKMNL FLHGEENHQI EWGDTIRNPK LRTSDDMLRH FDVVVANPPF SLDKWGVESA
EADKFARFRR GIPPKTKGDY AFILHMIETL KPKTGRMAVV VPHGVLFRGS SEGKIRHKLI
EDNLLDAVIG LPEKLFFGTG IPSAILVFRK DKADDSVLFV DASREFVAGT NQNALDMTLI
EKIVATHQTR QTVEKYAYRA TLAEIIENDF NLNIPRYVDT FEEEEEIDLM AVRAERMKLK
GEMAELEDRM EGYLQELGY
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