| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3538 |
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| Symbol | |
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| ID | 4075216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 575970 |
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| End bp | 578069 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005052 |
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| Product | protein of unknown function DUF1524 RloF |
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| Protein accession | YP_611771 |
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| Protein GI | 99078513 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1479] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00806563 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA CCGATGCCAA CCTCCTGAAC TTCATCAACA GCGCGCCGCA GTTCGTCATT
CCGATCTATC AGCGGACCTA TTCCTGGACC GAGCGTGAGT GTCGGCAGTT GTGGGAGGAT
ATCCGGCGTG CGGGGCGCAG TGGTCATATC CCCGTGCATT TCCTTGGCTC GGTCGTTTAC
ATCGAAGAAA GCCTGTCCAA CACGTCCAGC CGCGCGCCGC TGCTTGTCAT CGACGGCCAG
CAGCGCCTGA CCTCGGTCAC GCTGCTCCTT TCTGCTCTGT CGCGCAAGGT GGCCGACGAG
GAGCCGGTCG ATGGCTTTTC GTTCAAGAAG ATCCGCAACC GGTACCTGAT GGACCCGGAT
GAAAGCGGCG AACGTGCTTT CAAGCTGTTA TTGTCCAAGA CGGACCGAAC GACGCTGAAC
GCGGTGGTGT CGGGTGATGA CCTGCCCGAG CCGCAATCGA TGCGTGTTGC CGAGAACTTC
AAGATGTTCT CACGTTGGCT CGACCAGGAC GACACGGCTG TGTCCGAGGT TTGCTCTGGC
CTTGCCAAGC TGATGATTGT GGACGTGGCG CTCAGCCGGG AACATGACAA CCCTCAGCTG
ATTTTCGAAA GCATGAACTC GACGGGCAAG GAGCTGTCGC AGGCCGATCT GATCCGCAAT
TTCGTCTTGA TGGGGTTGGA GCCGAAACTG CAAACACGGC TCTATGAGCA ATACTGGCGG
CGCATGGAAG AAGGTTTTGG TCAGGCAGCC TATGCCTCGC ACTTTGATGG CTTCATGCGG
AATTATCTGA CGGTCGTGAC AGGGTCGATC CCTAGGCTTG ATGATGTCTA CGATGCGTAC
AAGGCGTATT CCCAGGAACA AATTGGCGGT GGCCGTGAGG TGGAAGACCT TGTGCGGGAG
GTCTGGGAAT TCTCGCAGTA CTACGGGGCG CTCGTACTGG GGCAAGAGAA AGATAAGGCC
TTGGCGCTCG GCTTCAGGGA TCTGCGAGAG CTGAAAGTTG ATGTCGCCTA CCCATTCCTT
CTGGAGGTCT ACAAAGACTA TAAGACGGGC GCTTTGAGCG CTGACGATTT CCTTGAAGTG
GTCCGCTTGG TCGAGGCCTA TGTCTTCCGT CGTGCGATCT GTTCCGTGCC CACGAACTCC
CTGAACAAGA CCTTTGCGAC ATTTGGCCGA GAGCTGAAAA AAGATCGCTA CCTGGAAAGC
GTCAAGGCAC ACATGCTCAA CATGAAGTCG TATCGCCGGT TTCCGCGTGA TGAAGAGTTC
GTCGCGCGCA TTCAGGACCG CGACCTCTAC AACTTCCGCA GCCGCACTTA CTGGCTTCGG
AAGTTCGAGA ACTTCGGAAG AAAAGAGCGC GTCGAGGTCG ACGATTACAC GATTGAGCAC
ATCCTGCCGC AGAACGAAAA GCTGTCAACG GAATGGCAAG CCGCCCTTGG ATCGGACTGG
GCTGCCGTGC AGGAGAAATG GCTTCACACG TTGGGGAACC TGACACTTAC CGGGTATAAT
TCCGAATACA GCGACAAGAG TTTCGCTGAG AAGCGCGACA TGGCTGGCGG CTTCAAGGAA
AGCCCTTTGC GCGTCAACAA CGGCTTGGGT TCGTTGGATG CGTGGAACGA AGCTGCGATC
AAGTCGCGAG CCCAACGACT TGCGCAGCAG GCCGCTGAAG TTTGGGCCGC ACCTTCTCTG
AGCGCCGAAA TCCTGGCGAC CTATCGTACC CCGACTGAAA TGGCCAACGG TTACACCATC
GAAGATCATC CTCACCTTAC ATCGGGCAAG ATGAGAGACC TCTTCGAGCA GTTCCGTCGC
GAAGTGATGG CGTTGGACCC GAGTGTAAGT GAACAGTTCC TGAAGATTTA CGTTGCTTAC
AAGGCCGAAA CAAATTTCGC GGATGTCGTA CCACAGGCCA AGGCGCTCAG GATTTCTATC
AACATTGAAC CTTATGAACT GCACGATCCG CGTGGGATGG CGGTCGATGT CACTGATGTA
GGTCGATGGG GCAATGGGAA TACCGAGGTC AAGCTAACGG ACCACGAGGA CCTGCCATAT
GTCTTGGGCC TGGTGCGGCA AGCACTGGAC CGTCAACTCG GAGCGGATGA GCCAGCATGA
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| Protein sequence | MKATDANLLN FINSAPQFVI PIYQRTYSWT ERECRQLWED IRRAGRSGHI PVHFLGSVVY
IEESLSNTSS RAPLLVIDGQ QRLTSVTLLL SALSRKVADE EPVDGFSFKK IRNRYLMDPD
ESGERAFKLL LSKTDRTTLN AVVSGDDLPE PQSMRVAENF KMFSRWLDQD DTAVSEVCSG
LAKLMIVDVA LSREHDNPQL IFESMNSTGK ELSQADLIRN FVLMGLEPKL QTRLYEQYWR
RMEEGFGQAA YASHFDGFMR NYLTVVTGSI PRLDDVYDAY KAYSQEQIGG GREVEDLVRE
VWEFSQYYGA LVLGQEKDKA LALGFRDLRE LKVDVAYPFL LEVYKDYKTG ALSADDFLEV
VRLVEAYVFR RAICSVPTNS LNKTFATFGR ELKKDRYLES VKAHMLNMKS YRRFPRDEEF
VARIQDRDLY NFRSRTYWLR KFENFGRKER VEVDDYTIEH ILPQNEKLST EWQAALGSDW
AAVQEKWLHT LGNLTLTGYN SEYSDKSFAE KRDMAGGFKE SPLRVNNGLG SLDAWNEAAI
KSRAQRLAQQ AAEVWAAPSL SAEILATYRT PTEMANGYTI EDHPHLTSGK MRDLFEQFRR
EVMALDPSVS EQFLKIYVAY KAETNFADVV PQAKALRISI NIEPYELHDP RGMAVDVTDV
GRWGNGNTEV KLTDHEDLPY VLGLVRQALD RQLGADEPA
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