| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3535 |
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| Symbol | |
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| ID | 4075214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 570824 |
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| End bp | 571621 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005050 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_611769 |
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| Protein GI | 99078511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.323423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.557897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCGG ATTGGCAGGT GTCGATCCGC CGGGCCTGCG AGGTGATCCG GTTCGATCCG
AGAACCTATC GCTACAAATC CCGCCGGCCT GGGCAGGCCG CTTTGGAACA GCGGATACGA
GAGATTTGCC AGACGCGCGT GCGCTTCGGC TACAGGCGCG TGCATGTGCT GCTGCGCCGG
GAGGGCTGGG AGATCAACGC CAAGAAGACC TATCGCATTT ACAAGGAGTT GGGTATGCAA
CTTCGGAGCA AGACACCTAA GCGCCGGGTG AAGGCCAAGC TGCGGGATGA CCGCAAGGAG
GCTGTCAGCC CCAATGACGT CTGGGCTATG GACTTTGTTC ATGATCAGCT GGCTACAGGC
TGGAAACTTC GGGTTCTGAC GGTCGTCGAC ACCTTCTCAC GCTATGTCCC GGTGCTTGAT
GCTCGGTTCA CATATCGCGG GGAGGACGTG GTCGCGACGC TTGAGCAAGT ATGCAAGCGC
ACCGGCTACC CAGCCACCAT CCGTGTTGAC CAGGGCAGCG AGTTCATCTC CAAGGATATG
GACCTTTGGG CCTATGCCAA CGACGTGACA TTGGACTTCT CCCGTCCGGG CAAACCTACC
GACAACGCCT TCATCGAGGC GTTCAATGGC CGGTTCCGGG CGGAGTGCCT GAACGCGCAC
TGGTTCATGA GCCTTGAAGA TGCAGCCGAA AAGTTGGAGG CTTGGCGTAG AGACTACAAT
GAAGAACGCC CGCACGGGGC TATCGGGAAC AAGGTCCCGG CAGACCTGAT GAAATCAGTT
CACGACACCA GCCCGTGA
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| Protein sequence | MRADWQVSIR RACEVIRFDP RTYRYKSRRP GQAALEQRIR EICQTRVRFG YRRVHVLLRR
EGWEINAKKT YRIYKELGMQ LRSKTPKRRV KAKLRDDRKE AVSPNDVWAM DFVHDQLATG
WKLRVLTVVD TFSRYVPVLD ARFTYRGEDV VATLEQVCKR TGYPATIRVD QGSEFISKDM
DLWAYANDVT LDFSRPGKPT DNAFIEAFNG RFRAECLNAH WFMSLEDAAE KLEAWRRDYN
EERPHGAIGN KVPADLMKSV HDTSP
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