Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3534 |
Symbol | |
ID | 4075213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 570525 |
End bp | 570791 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638005049 |
Product | transposase IS3/IS911 |
Protein accession | YP_611768 |
Protein GI | 99078510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.545436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.522486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAT CGAAGTTCAC GGACGCGCAG AAGGCGTTCA TCATCAAGCA GGCGGAGGAC GGCACCTCGG TGGCCGAGGT CTGCCGCAAG GCCGGGATCA GCACGGCGAC ATTTTTCAAC TGGAAGAAAA AATATGCTGG CCTGATGCCA TCCGAGATGA AACGGCTCAG GGAACTCGAG CAGGAGAACG CGCGTCTGAA GAAGATCGTC GCGGATCTCG CGCTCGACAA GGAAATGCTG CAGGACGTCA TTAAGCGAAA GCTTTGA
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Protein sequence | MKASKFTDAQ KAFIIKQAED GTSVAEVCRK AGISTATFFN WKKKYAGLMP SEMKRLRELE QENARLKKIV ADLALDKEML QDVIKRKL
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