Gene TM1040_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3534 
Symbol 
ID4075213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp570525 
End bp570791 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content56% 
IMG OID638005049 
Producttransposase IS3/IS911 
Protein accessionYP_611768 
Protein GI99078510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.545436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.522486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAT CGAAGTTCAC GGACGCGCAG AAGGCGTTCA TCATCAAGCA GGCGGAGGAC 
GGCACCTCGG TGGCCGAGGT CTGCCGCAAG GCCGGGATCA GCACGGCGAC ATTTTTCAAC
TGGAAGAAAA AATATGCTGG CCTGATGCCA TCCGAGATGA AACGGCTCAG GGAACTCGAG
CAGGAGAACG CGCGTCTGAA GAAGATCGTC GCGGATCTCG CGCTCGACAA GGAAATGCTG
CAGGACGTCA TTAAGCGAAA GCTTTGA
 
Protein sequence
MKASKFTDAQ KAFIIKQAED GTSVAEVCRK AGISTATFFN WKKKYAGLMP SEMKRLRELE 
QENARLKKIV ADLALDKEML QDVIKRKL