| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3517 |
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| Symbol | |
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| ID | 4075196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 553904 |
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| End bp | 554866 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005032 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_611751 |
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| Protein GI | 99078493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.734695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAC CCAAAATCGC CCTCATCGGC GCAGGTCAGA TCGGTGGCAC CCTCGCACAT
CTTGTAGCCC TCAAAGAACT CGGCGACGTC GTTTTGTTCG ACATCGCAGA AGGCACCCCC
GAAGGCAAAG CGCTGGACAT CGCAGAATCC GGTCCTTCCG AAGGCTTTGA CGCAAGCCTC
AAAGGCACCC AGGATTATGC CGACATCGCG GGCGCGGACG TCTGCATCGT GACCGCGGGC
GTTCCGCGCA AGCCGGGCAT GTCCCGCGAC GACCTCCTGG GCATCAACCT CAAGGTGATG
AAATCCGTCG GCGAAGGCAT CCGCGACAAC GCGCCGGACG CCTTTGTGAT CTGCATCACC
AACCCGCTCG ACGCGATGGT TTGGGCGCTG CGCGAATTCT CCGGCCTGCC GCACGAAAAA
GTCTGCGGCA TGGCGGGTGT TCTGGACAGC GCGCGCTTCC GTCACTTCCT CGCGGAGGAA
TTCAACGTCT CCATGAAAGA CGTCACCGCG TTTGTGCTCG GTGGCCATGG CGACACCATG
GTGCCGTCGG TGCGTTACTC CACCGTAGCA GGCATTCCGC TCCCCGACCT GATCGAGATG
GGCTGGACCA CCCAGGACAA GATGGACGCG ATCGTTCAGC GCACCCGTGA CGGTGGCGCC
GAAATCGTGG GTCTCCTGAA AACCGGCTCC GCCTATTACG CGCCTGCGAC CTCTGCAATC
GAGATGGCAG AAGCCTATCT CAAGGACCAG AAGCGCGTCC TGCCCTGCGC GGCCTATGTG
GACGGCGCTC TGGGTCTCAA CGGCATGTAT GTCGGCGTTC CGACCGTGAT CGGTGCCGGA
GGCATCGAGC GTGTGGTCGA CATCAAGCTG AACGCTGAAG AGCAGGCGAT GTTCGACACC
TCCGTCAACG CGGTCAAAGG CCTCGTAGAC GCGTGCAAAG GCATCGACAG CTCGCTGGCA
TAA
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| Protein sequence | MARPKIALIG AGQIGGTLAH LVALKELGDV VLFDIAEGTP EGKALDIAES GPSEGFDASL
KGTQDYADIA GADVCIVTAG VPRKPGMSRD DLLGINLKVM KSVGEGIRDN APDAFVICIT
NPLDAMVWAL REFSGLPHEK VCGMAGVLDS ARFRHFLAEE FNVSMKDVTA FVLGGHGDTM
VPSVRYSTVA GIPLPDLIEM GWTTQDKMDA IVQRTRDGGA EIVGLLKTGS AYYAPATSAI
EMAEAYLKDQ KRVLPCAAYV DGALGLNGMY VGVPTVIGAG GIERVVDIKL NAEEQAMFDT
SVNAVKGLVD ACKGIDSSLA
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