| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3514 |
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| Symbol | sucC |
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| ID | 4075193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 550901 |
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| End bp | 552094 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005029 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_611748 |
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| Protein GI | 99078490 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.764048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC ACGAATATCA GGCCAAGGCC CTCCTTCGCA GCTACGGCGC TCCGGTTTCG
GACGGGCGCG TGGTGATGAA AGCAGACGAA GCCAAAACCG CAGCAGGCGA GCTTGACGGC
CCGCTTTGGG TCGTGAAGGC CCAGATCCAC GCAGGTGGTC GCGGCAAGGG CTCCTTCAAG
GAAGCCGACG CCGGTGAAAA AGGCGGCGTA CGCCTGACCA AATCGGTCGA AGAAGCCGCC
GAAGAAGCCA AGAAGATGCT GGGCCGCACC CTCGTGACCC ACCAGACCGG CCCGGCGGGC
AAGCAGGTGA ACCGCATCTA CATCGAGGCG GGCTCTGGCA TCCAGACCGA GCTGTATCTG
GCGCTGCTGG TGGATCGCGT GACCTCCCGC GTGTCTTTTG TCTGCTCCAC CGAGGGCGGC
ATGGACATTG AAGAAGTCGC CGCTGAGACC CCGGAAAAGA TCCTGTCGTT CTCCGTTGAT
CCGGCCACCG GCTATCAGGC GTACCACGGG CGCCGCGTTG CCTTCTCGCT CGGCCTTGAG
GGCGCGCAGG TGAAGCAGTG CGTCAAGCTG ATGGGTCAGC TCTACCAAGC CTTCATCGAG
AAGGACATGG AGATGCTGGA GATCAACCCG CTGATCGTCG CCGACAATGG TGACCTGAAA
GTGCTGGACG CAAAGGTCGG TTTCGACGGC AACGCGATCT ATCGCCACGC CGATATCGCC
GCCCTGCGCG ACGAGACCGA AGAAGACCCC AAAGAGCTCG AAGCGTCCAA GTACGACCTG
AACTACATCG CGCTCGACGG TGAGATCGGC TGCATGGTGA ACGGCGCGGG TCTGGCGATG
GCCACCATGG ACATCATCAA GCTCTATGGA GCAGAGCCTG CGAACTTCCT CGATGTGGGC
GGCGGCGCCA CCAAAGAGAA AGTGACCGAA GCGTTCAAGA TCATCACCTC CGACAAGAAC
GTCAAAGGTA TCCTCGTGAA CATCTTTGGC GGCATCATGC GCTGCGACGT GATCGCAGAA
GGCGTGATTG CAGCCGTGAA AGAAGTGGGC CTTGAGGTGC CGCTGGTTGT GCGTCTCGAA
GGCACAAACG TCGAGAAGGG CAAAGAAATC ATCGCGAACT CCGGTCTTAA CGTGATCGCG
GCAGATGATC TGTCCGATGG GGCCGAGAAG ATCGTGAAAG CGGTAAAGGG TTAA
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| Protein sequence | MNIHEYQAKA LLRSYGAPVS DGRVVMKADE AKTAAGELDG PLWVVKAQIH AGGRGKGSFK
EADAGEKGGV RLTKSVEEAA EEAKKMLGRT LVTHQTGPAG KQVNRIYIEA GSGIQTELYL
ALLVDRVTSR VSFVCSTEGG MDIEEVAAET PEKILSFSVD PATGYQAYHG RRVAFSLGLE
GAQVKQCVKL MGQLYQAFIE KDMEMLEINP LIVADNGDLK VLDAKVGFDG NAIYRHADIA
ALRDETEEDP KELEASKYDL NYIALDGEIG CMVNGAGLAM ATMDIIKLYG AEPANFLDVG
GGATKEKVTE AFKIITSDKN VKGILVNIFG GIMRCDVIAE GVIAAVKEVG LEVPLVVRLE
GTNVEKGKEI IANSGLNVIA ADDLSDGAEK IVKAVKG
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