| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3504 |
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| Symbol | |
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| ID | 4075183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 540502 |
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| End bp | 541899 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005019 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_611738 |
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| Protein GI | 99078480 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.305711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCT ATGACGTCAT CGTAATCGGC GCCGGTCCCG GCGGCTATGT CAGCGCAATC
CGCTGCGCCC AGCTGGGCCT CAAGACCGCC ATCGTAGAAG GCCGCGAAAC CCTTGGCGGC
ACCTGCCTCA ACGTGGGCTG CATCCCCTCC AAGGCGCTCT TGCACGCAAC CCATATGCTG
CATGAAGCAG AGCACAACTT CGGCGCCATG GGTCTCAAGG GCAAAAGCCC CTCGGTCGAC
TGGAACCAGA TGAAATCCTA CAAGGATGAG GTCATCGGCC AGAACACCGG CGGTGTCGAG
TTCCTCATGA AGAAGAACAA GATCGACTGG ATCAAGGGCT GGGCGTCGAT CCCCGAGGCG
GGCAAGGTCA AAGTGGGCGA CGACACCCAT GAGGCCAAGA ACATCATCAT CGCCTCCGGC
TCCGTGCCCT CCGCCCTGCC GGGTGTCGAG GTCGACAACG ACAAGGGCCT TGTGGTCGAC
AGCACCGGCG CTCTGGAACT GCCCAAAGTC CCGAAGAAAA TGGTCGTGAT CGGCGCAGGC
GTCATTGGCC TCGAGCTCGG CTCGGTCTAC GCGCGCCTTG GCGCAGAGGT CACCGTGGTC
GAATATATGG ACGCGGTCTG TCCCGGCATG GACAAGGACG TCCAGCGCGG CTTCAAACGC
ATCCTTGAAA AGCAGGGCCT CAGCTTCATC ATGGGGGCCG CCGTCAAGGG CGTTGAAACC
ACGAAATCCA AGGCCAAAGT CTCTTATGAG CCCAAAAAAG GCGGCGACGC AGAGGTCATC
GAGGCCGATG TGGTGCTCGT CGCCACGGGG CGCAAACCCT ATGCCGAAGG CCTTGGCCTC
GACGCGCTTG GCGTCAAGAT GACCGAACGC GGCCAGATCG CCACCGACGC GCAATGGGCC
ACGAACGTCA AAGGCATCTA CGCCATCGGC GACGTCATCG AGGGTCCGAT GCTCGCGCAT
AAGGCCGAAG ACGAAGGCAT GGCCGTGGCC GAAGTGATCG CGGGCAAACA TGGCCACGTG
AATTACGGCG TCATTCCCGG TGTGGTCTAC ACCACCCCAG AGGTGGCGAC CGTCGGTGCC
ACCGAAGACG CGCTCAAGGC CGAAGGTCGC AAGATCAAGG TGGGCAAGTT CATGTTCATG
GGCAACGCCC GCGCCAAGGC CGTGCATCAG GCCGAGGGTG GTTTTGTGAA ACTGATTGCC
GACAAGGAAA CCGACCGCAT CCTCGGTGCG GCCATCATCG GCCCCGGTGC AGGCGATCTG
ATCCACGAGA TCTGTGTGGC GATGGAATTT GGCGCCTCCG CCGAGGATCT GGCGCTGACC
TGCCACGCGC ATCCGACCTA TTCCGAGGCC GTGCGCGAAG CAGCCCTTGC CTGCGGCGAC
GGCGCGATCC ACAGTTAA
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| Protein sequence | MASYDVIVIG AGPGGYVSAI RCAQLGLKTA IVEGRETLGG TCLNVGCIPS KALLHATHML
HEAEHNFGAM GLKGKSPSVD WNQMKSYKDE VIGQNTGGVE FLMKKNKIDW IKGWASIPEA
GKVKVGDDTH EAKNIIIASG SVPSALPGVE VDNDKGLVVD STGALELPKV PKKMVVIGAG
VIGLELGSVY ARLGAEVTVV EYMDAVCPGM DKDVQRGFKR ILEKQGLSFI MGAAVKGVET
TKSKAKVSYE PKKGGDAEVI EADVVLVATG RKPYAEGLGL DALGVKMTER GQIATDAQWA
TNVKGIYAIG DVIEGPMLAH KAEDEGMAVA EVIAGKHGHV NYGVIPGVVY TTPEVATVGA
TEDALKAEGR KIKVGKFMFM GNARAKAVHQ AEGGFVKLIA DKETDRILGA AIIGPGAGDL
IHEICVAMEF GASAEDLALT CHAHPTYSEA VREAALACGD GAIHS
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